| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Caci_1605 |
|---|
| Symbol | |
|---|
| ID | 8332948 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Catenulispora acidiphila DSM 44928 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013131 |
|---|
| Strand | + |
|---|
| Start bp | 1819106 |
|---|
| End bp | 1822744 |
|---|
| Gene Length | 3639 bp |
|---|
| Protein Length | 1212 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 70% |
|---|
| IMG OID | 644954755 |
|---|
| Product | coagulation factor 5/8 type domain protein |
|---|
| Protein accession | YP_003112367 |
|---|
| Protein GI | 256390803 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 10 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 21 |
|---|
| Fosmid unclonability p-value | 0.232079 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTCCAGAT CCACACGCGC CGGGATTTCC GGCGCGCGAC CGTACTCGCC ACGCCGTTCG
CTGGCCGCCG CCCTCGGGGC GGTGCTGGTC TCCACCGGTA CCCTGGTCGC CCTCGCCGCC
TCGCCCGCGG CCGCGGCCGG CGCCACCGGC GGATCGGGGG CGAACCTGCC CTATGTGGAG
GTCCAGGCCG CGAAGGCGAC CGCGACCACC GGAACCCTGA TCGGTCCCAG CGTCATGCAG
GGGCAGCTGG CCGACGAGGC CGCCTACCGG CAGGCCGTCA CCCTGGCCGG CAACGGCTCG
GGCCAGAGCA TCACCTTCAC CACCCCGGTC GCGACCAACT CGATCAACAT CCGCTACAGC
ATCCCGGACA GCTCGAACGG CTCGGTCTAC ACCGCGCCGC TGTCGCTGTA CGTCAACGGG
ACCAAGCAGC AGAACCTGAC GCTGACCAAC GCCTACAGCT GGTACTACGG CGGCTATCCG
GGCAGCAACT CCCCGGGCAG CACCCCGCAC CACTTCTACG ACGAGGCGCA CCAGCTGTTC
AGCACCACCT ATCCGGCCGG CACGACGTTC AAGCTGCAGG TCGACTCCGG GGACAGCGCC
GCGTCCTACA CGGTCAACTT CGCCGACTTC GAGAACGTCG GCCCGGCGCT GACCCAGCCG
GCCGGCTCGG TCTCGGTGAC CAGCGAGGGC GCCGACGCCA CCGGCGCCGG TGACTCCACG
GCCGCCTTCA ACGCCGCCAT CGCCGCCGCC GGGCCCGGCG GCACGGTGTG GATCCCGCAG
GGCACGTTCA ACATCCCGCG CCACATCACG GTCAACAACG TGACGGTGGC CGGCGCCGGC
ATGTGGTACT CCACGGTGAC CGGCGCGGCG CCCGGCTTCT ACGGCCTCGG CGAGCCCGAC
AGCTGCGGAG TCGGCGGCAA CAAGGGCTCC AGCAACAACG TGCACCTGTC CAACTTCGCG
ATCTTCGGCA ATGTCCAGAC CCGCAACGAC TGCGACCAGG TCAACGGCAT CGGCGGCGCG
ATGAACAACT CGACCGTCAG CAACATCTGG ATCGACCACA TGAAGGTCGG CGCCTGGATG
GACGGGCCGA TGGACAAGAT CTCCTTCAGC GGGATGCGCA TCCGCGACAC CTCCGCCGAC
GGCATCAACT TCCACGGCGG CGTCACCAAC TCCTCGGTGA CGAACAGCGA CATCCGCAAC
ACCGGTGACG ACGGCATCGC GCAGTGGGCC GACTCGGGCC TGGGCGCCGA CGCCAACGAC
ACCATCTCCA ACAACACGGT CTCCGACCAG ATCCTGGCCA ACGGCATCGC GATCTACGGC
GGCCACGACA ACACCGTCAC CGGCAACCTG GTCGTGGACT CCGGCATATC GCAGGGCGGC
GGCATCCACG TCGGACAGCG CTTCACCTCC ACCCCGGTCG GTCTGACCAC GATCTCCAAC
AACACCCTGA TCCGCGACGG CGACCTGGAC CCGAACTGGC AGTTCGGCGT CGGCGCGCTG
TGGTTCGACG GCAGCCAGGG CGCGATCACC GGGCCGATCA AGGTCAGCAA CGCCCTGATC
GAGCAGAGCC CGTTCGAGGC GGTCCAGTGG GTCGAGGGCA CGGTCAGCGG CGTCTCGCTG
ACCGACGTGA CCATCGCCGG GACCGGCACC TTCGCGATGC AGGAGCAGAC CGGCGGCTCG
GCGACGTTCA CCAACGTCAC CGCCACCGGC GTCGCGCAGG CCAACCAGGG CAACGCCCCG
AGCTACAGCT GTGAGGGCAA CGCCTTCGCG GTCACCGACG GCGGCGGCAA CTCCGGCATC
AGCCCGACCT CGTGCCTGAG CGACAACCCG ACCGAGGTCT TCCCGCCCTA CCCGGCCAGC
AGCGTCACCA CCAGCCCGGG TTCGCTGAAC TTCGGCTCGG TGGCGACCGG CGCGACCAGC
GCGGCGCAGA CCGTGACGGT CTCGAACCCG ACCGGTTCGG CCGCCTCGGT GTCCTCCATC
ACCGCCAGCG GTGACTTCGC GCAGACCAAC AACTGCGGGT CGTCCATCGC CGCCAACGGC
TCCTGCACGG TGAACGTCAC CTTCAAGCCG ACCGCCTCCG GTGCGCGCAC CGGCAGCCTG
ACCGTCACCG CCGGCGGCGT CACCAACACC GTCACGCTCT CCGGCAGCGG CATCGCGCCC
GGACCGGTGC TCAACGCCAA CCCGGCGAGC CTGTCCTTCG CCCGCACCGC GGTCGGCGCC
TCGACCGGGA CGCAGGCGGT GACCATCAGC AACAACGGCA CCAGCGCGGC GAGCGTCTCA
GGGGTCTCGG TCACCGGCGA CTTCAGCCAG ACCAACAACT GCTCCTCGAT CGCCGTCAAC
GGCTCCTGCA CGGTGAACGT CAAGTTCGCC CCGACCGCCG GCGGCTCGCG CACCGGCACA
CTGACCGTCG CCAGCAACGC CAACAACGCC CCGACCACCG TGGCGCTCAG CGGTACCGGC
GTCGACGGCT CGGTGAACCT GGCCGCCGGG CAGCCGGCCA CGGCCAGCTC CAGCAACGGC
TCCTTCGTTC CGGGCAACCT GACCGACGCC GACGCCTCGA CCTACTGGGA AAGCGCGAAC
GGCGCCTTCC CGCAGTGGGC CCAGGTCGAC CTCGCCCAGA ACTGGAACGT CGGCAAGGTC
GTGCTGCGCC TGCCGCCGTC GACCGCGTGG GGTGCCCGCA CCCAGACGCT GTCGGTGCTC
GGCTCGACCG ACGGCTCGAA CTTCAGCACC CTGGTGGGTT CGGCGACGTA CACCTTCGAC
CCGAACGCCA ACAACAACAC GGTGACCATC CCGTTCACCG GCACCTCCGT CCGCTACGTC
CGGATCAACG TCACCGCCAA CAGCGGCTGG CAGGCCGCGC AGCTCTCGGA CATCCAGGCC
TACCTCGGTA GCGGCGGCGG CACCACGGGC CCGTCGATCG CGACGAACCC GGCCAGCGTG
TCCTTCGGCA GCCAGGCCGT CGGCAGCACC TCGGCCGCCA GCGCGGTGAG CGTGAGCAAC
ACCGGCAACG GTGCGGCGTC GATCTCCTCG ATCACCGCCA ACGGCGACTT CGCGCAGACC
AACAACTGCG GCAGCTCGCT GGCCGCCGGC GCGTCCTGCA CCGTGAACGT CACCTTCACC
CCGACCGCCT CCGGCGCCCG GACCGGCACG CTGAGCATCG CCAGCAACGC CCCCGGCAGC
CCGGCGACGG TCGCTTTGAG CGGCACCGGC GGCTCCAGCG CGAACACCAA CCTGGCGCTG
AACCAGCCGA CGTCGGCCAG CGGGTCCACG CAGAACTACG TGCCGGGCAA CACGGTCGAC
GGCAACACCA ACAGCTACTG GGAGAGCACG GACAACGCGT TCCCGCAGTG GCTGCAGGTC
GACCTCGGCG CGTCGAAGAG CATCAGCAAG ATCGTGCTCG ACCTCCCGCC GTCCAGCTCC
TGGGCCACCC GGACCCAGAC GCTGTCGGTG CAGGACTCCA CCACCAACAG CACCTTCTCC
ACTGTGGTGG GGTCGGCGAC CTACACCTTC AACCCCTCGA CCGGGAACAC CGTGACCATC
ACGTTCCCGG CGGCCACCAC GCGGTACGTG CGGCTGAACT TCACCGCCAA CAGCGGGTGG
CCGGCCGGGC AGCTCTCGGA GTTCCAGATC TTCCAGTGA
|
|---|
| Protein sequence | MSRSTRAGIS GARPYSPRRS LAAALGAVLV STGTLVALAA SPAAAAGATG GSGANLPYVE
VQAAKATATT GTLIGPSVMQ GQLADEAAYR QAVTLAGNGS GQSITFTTPV ATNSINIRYS
IPDSSNGSVY TAPLSLYVNG TKQQNLTLTN AYSWYYGGYP GSNSPGSTPH HFYDEAHQLF
STTYPAGTTF KLQVDSGDSA ASYTVNFADF ENVGPALTQP AGSVSVTSEG ADATGAGDST
AAFNAAIAAA GPGGTVWIPQ GTFNIPRHIT VNNVTVAGAG MWYSTVTGAA PGFYGLGEPD
SCGVGGNKGS SNNVHLSNFA IFGNVQTRND CDQVNGIGGA MNNSTVSNIW IDHMKVGAWM
DGPMDKISFS GMRIRDTSAD GINFHGGVTN SSVTNSDIRN TGDDGIAQWA DSGLGADAND
TISNNTVSDQ ILANGIAIYG GHDNTVTGNL VVDSGISQGG GIHVGQRFTS TPVGLTTISN
NTLIRDGDLD PNWQFGVGAL WFDGSQGAIT GPIKVSNALI EQSPFEAVQW VEGTVSGVSL
TDVTIAGTGT FAMQEQTGGS ATFTNVTATG VAQANQGNAP SYSCEGNAFA VTDGGGNSGI
SPTSCLSDNP TEVFPPYPAS SVTTSPGSLN FGSVATGATS AAQTVTVSNP TGSAASVSSI
TASGDFAQTN NCGSSIAANG SCTVNVTFKP TASGARTGSL TVTAGGVTNT VTLSGSGIAP
GPVLNANPAS LSFARTAVGA STGTQAVTIS NNGTSAASVS GVSVTGDFSQ TNNCSSIAVN
GSCTVNVKFA PTAGGSRTGT LTVASNANNA PTTVALSGTG VDGSVNLAAG QPATASSSNG
SFVPGNLTDA DASTYWESAN GAFPQWAQVD LAQNWNVGKV VLRLPPSTAW GARTQTLSVL
GSTDGSNFST LVGSATYTFD PNANNNTVTI PFTGTSVRYV RINVTANSGW QAAQLSDIQA
YLGSGGGTTG PSIATNPASV SFGSQAVGST SAASAVSVSN TGNGAASISS ITANGDFAQT
NNCGSSLAAG ASCTVNVTFT PTASGARTGT LSIASNAPGS PATVALSGTG GSSANTNLAL
NQPTSASGST QNYVPGNTVD GNTNSYWEST DNAFPQWLQV DLGASKSISK IVLDLPPSSS
WATRTQTLSV QDSTTNSTFS TVVGSATYTF NPSTGNTVTI TFPAATTRYV RLNFTANSGW
PAGQLSEFQI FQ
|
|---|
| |