Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Caci_1477 |
Symbol | |
ID | 8332816 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Catenulispora acidiphila DSM 44928 |
Kingdom | Bacteria |
Replicon accession | NC_013131 |
Strand | + |
Start bp | 1681283 |
End bp | 1683082 |
Gene Length | 1800 bp |
Protein Length | 599 aa |
Translation table | 11 |
GC content | 70% |
IMG OID | 644954625 |
Product | type III restriction protein res subunit |
Protein accession | YP_003112241 |
Protein GI | 256390677 |
COG category | [K] Transcription [L] Replication, recombination and repair |
COG ID | [COG1061] DNA or RNA helicases of superfamily II |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 30 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGAGCATCT CTGCGGCCTC CCATCTATCC CCGTCCTACC CGGACCGCGC CGCGCGCGGC ACCGCCAACC GGCTCCGCGC CTGGCAGCAA GCAGCGCTGG ACGAATACAT GGGCCGCGAG CCCCGGGACT TCCTCGCGGT CGCCACCCCC GGCGCCGGCA AGACCACGTT CGCGCTCCGC ATCGCCACCG AGCTGCTGGA CCGCCACGTC GTGAACACCA TCACGATCGT CGCGCCGACC GAGCACCTCA AGACGCAGTG GGCTGAGGCG GCGCACCGCG TCGGGATAAG GATCGACCCG AACTACAGCG GCGCGGCGGG CGGCACGTCG CGCGACTACC AGGGCATCGC CGTGACGTAC GCCGGCGTCG CCGCGCACCC GATGCTGCAC CGGCGCCGCG TCGAGGGTCG CAGGACCCTG GTGATCCTCG ACGAGATCCA CCACGCCGGC GACTCCAAGT CCTGGGGCGA GGCCGCCTAC GAGGCGTTCG AGCCGGCGGC CCGCCGCCTG GCGCTGACCG GTACGCCGTT CCGCTCGGAC ACGAACCCGA TCCCGTTCGT CACCTACGCG CCGGACAACG AGGGCATCCG CCGCAGCATC GCGGACTACT CCTACGGCTA CGGCTCGGCG CTCTCCGACG GCGTGGTGCG GCCGGTGGTG TTCATGTCCT ACGCCGGCCG CATGCGCTGG CGCACCAAGG CCGGCGACGA GATCGCCATG CAGCTCAACG AGCCGATGAC GAACGACGCG GTGAAGCAGG CCTGGCGCAC CGCCCTGGAC CCGGCCGGCG ACTGGATGCC GCAGGTCCTG CGCGCCGCCG ACCGCCGCCT GCGCGAGGTG CGCCGCGGCA TCCCCGACGC CGGCGGCCTG GTCATCGCCA CCGACCAGGG CGCGGCGCGC GCCTACGCGG ACATGCTCAA GGACATCACC GGCAAGCGCC CGATGGTCGT CGTCTCGGAC GACCCCTCCG CCTCAGCGAA CATCTCCGAG TTCACAGAGA ACGACGACCG CTGGATGGTC GCGGTCCGCA TGGTGTCCGA GGGCGTCGAC GTTCCGCGCC TGGCCGTCGG CGTATACGCC ACCGCCATCT CCACACCGCT GTTCTTCGCC CAGGCGGTCG GCCGCTTCGT GCGCGCACGC CGCCACGGCG AGACCGCGTC GGTCTTCGTC CCTTCCATCC CCATGCTCCT CGAGTTCGCG AGCGAGATGG AGAAGCAGCG CGACCACGCC CTCGACAAGC CGACCCAGGC CACCACGACC GAGGACGTCT GGGGCGAGGA AGAGGCCCTG CTCGCCGAGG CGAACCGCAC CGAGAAGGAG CAGGGCTACG AAGAGGAACT CTTCACCTTC CAAGCCCTGA ACTCCGAAGC CGAATTCGAC CGGGTCCTTT ACGACGGCGC AGAATTCGGC CTCCCCGCCG ACCCCGGCTC CCGCGAGGAA GCGGAGTACC TGGGCCTGCC CGGCCTCCTG GAACCAGAGC ACATCAAGGT CCTGCTAGCC AAACGCCAGC AGATGCACCT CACCAGCGCC CGCAAAAAAG CGCTCCTCCG CTCCCAAGCC GAGGCCATCG TGGGCGCCGA AGAACGCCCG GTGATGACCC GCAAACAACT CCTGGAACTC CGCAAGGAGC TCCAAGGACT CGTCGGCGCC TGGCACCACA AAACCGGCAA GCCGCACGGC ACCATCCATG GCGAACTACG CCGCACCTGC GGCGGACCCG CCGTGGCACA AGCGACGGCG ACGCAGCTGC AGAAGCGGAT CGACATGGTG CGCCGGTGGG CTGCTGAGGG CGGGCACTAG
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Protein sequence | MSISAASHLS PSYPDRAARG TANRLRAWQQ AALDEYMGRE PRDFLAVATP GAGKTTFALR IATELLDRHV VNTITIVAPT EHLKTQWAEA AHRVGIRIDP NYSGAAGGTS RDYQGIAVTY AGVAAHPMLH RRRVEGRRTL VILDEIHHAG DSKSWGEAAY EAFEPAARRL ALTGTPFRSD TNPIPFVTYA PDNEGIRRSI ADYSYGYGSA LSDGVVRPVV FMSYAGRMRW RTKAGDEIAM QLNEPMTNDA VKQAWRTALD PAGDWMPQVL RAADRRLREV RRGIPDAGGL VIATDQGAAR AYADMLKDIT GKRPMVVVSD DPSASANISE FTENDDRWMV AVRMVSEGVD VPRLAVGVYA TAISTPLFFA QAVGRFVRAR RHGETASVFV PSIPMLLEFA SEMEKQRDHA LDKPTQATTT EDVWGEEEAL LAEANRTEKE QGYEEELFTF QALNSEAEFD RVLYDGAEFG LPADPGSREE AEYLGLPGLL EPEHIKVLLA KRQQMHLTSA RKKALLRSQA EAIVGAEERP VMTRKQLLEL RKELQGLVGA WHHKTGKPHG TIHGELRRTC GGPAVAQATA TQLQKRIDMV RRWAAEGGH
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