Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Caci_1471 |
Symbol | |
ID | 8332810 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Catenulispora acidiphila DSM 44928 |
Kingdom | Bacteria |
Replicon accession | NC_013131 |
Strand | + |
Start bp | 1674480 |
End bp | 1675097 |
Gene Length | 618 bp |
Protein Length | 205 aa |
Translation table | 11 |
GC content | 73% |
IMG OID | 644954619 |
Product | hypothetical protein |
Protein accession | YP_003112235 |
Protein GI | 256390671 |
COG category | [K] Transcription |
COG ID | [COG1678] Putative transcriptional regulator |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 33 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACGGACG CAGGGCGCGA CGCGGGGGAG CAGGACAGCG GCAGAGTGCC GCTGGAACGG CTGACCGGCA AACTGCTGGT CGCCACCACG GTCCTGGTCG ACCCCAACTT CGACCGCACG GTGGTGCTGG TCGTCGACCA CGACGACGAC GGCACGCTCG GCGTCGTCCT CAACCGGCCC GGGAGCCTGG ACGTCGAGGA CGTGCTGGAG ACCTGGGCGC CGCTGGCGGC CGAGCCGCCG ACGGTGTTCC TGGGCGGCCC GGTCGCGCTG GACTCCGCGC TGGGCATCGC CTGTGTGCGT CCGGAGGCGG CGGTGCCGGG CGAGGAGCCG CTGGGCTGGC GCCAGTTCTC CGGACGCCTG GGCCTGGTGG ACCTGGACGC GCCGCCGGAA GTGCTGGCGC CGGACCTGAC GGCGTTGCGG ATCTTCGCCG GGTACGCCGG CTGGGGACCG GGGCAGCTGG CCGGCGAGCT GGCGCAGCGG GCGTGGTACG TGGTCGAGCC GGAGCTGGCC GACGTGTTCA CCACCGAGCC GGAGGAGCTG TGGCGCCGGG TGCTGCGCCG CCAGGGCGGG ACCATCGCGA TGGTCGCGAA CTGGACCGAG GACCCTGATC TCAATTAA
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Protein sequence | MTDAGRDAGE QDSGRVPLER LTGKLLVATT VLVDPNFDRT VVLVVDHDDD GTLGVVLNRP GSLDVEDVLE TWAPLAAEPP TVFLGGPVAL DSALGIACVR PEAAVPGEEP LGWRQFSGRL GLVDLDAPPE VLAPDLTALR IFAGYAGWGP GQLAGELAQR AWYVVEPELA DVFTTEPEEL WRRVLRRQGG TIAMVANWTE DPDLN
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