Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Caci_1451 |
Symbol | |
ID | 8332790 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Catenulispora acidiphila DSM 44928 |
Kingdom | Bacteria |
Replicon accession | NC_013131 |
Strand | + |
Start bp | 1654369 |
End bp | 1655766 |
Gene Length | 1398 bp |
Protein Length | 465 aa |
Translation table | 11 |
GC content | 70% |
IMG OID | 644954599 |
Product | MATE efflux family protein |
Protein accession | YP_003112215 |
Protein GI | 256390651 |
COG category | [V] Defense mechanisms |
COG ID | [COG0534] Na+-driven multidrug efflux pump |
TIGRFAM ID | [TIGR00797] putative efflux protein, MATE family |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 27 |
Fosmid unclonability p-value | 0.815185 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACGTCCG AGCACAGCTT CCGCCCGACG GCCGAGGACG CACGGTTGCT GAAGCTCGCG CTGCCGGCGT TGGGGAACCT CGTCGCCGAG CCGTTGTTCC TGCTCGCGGA CTCCGCGATC GTCGGGCATC TCGGGACTCC GCAACTGGCC GGGCTGGCGG CGGCGAGTGC GTTGCTGGCG ACGCTGACGT ACCTGTGCGT GTTCCTTGCT TATGGGACGA CAGCTGCCGT CGGGCGCCGG ATCGGCGCGG GGGACCTGCC GGGCGCGGTG CGGCAGGGCG TGGACGGGAT GTGGCTCGGC GTGATCCTCG GCGTGGTGCT GGGACTCGCC GGGATCGTGT TCGCCGCGCC GCTGGTGCGG GTGTTCGGGG CGTCGCCTGA GGCGGTGCCT TATGGCGTGA CGTATCTGCG GATCGCCTCT ATCGGACAGC CGGCGATGCT CCTAGTGCTC GCCTCTACAG GAGTCCTGCG AGGTCTGCAG GACATTCGCA CGACACTTGT AGTGGCGGCG ACCGGCGCCG GGATGAACGT CGTGCTGAAC CTGGTGCTCG TCTATCCCGT GGGGATGGGG ATCGCGGGGT CCGCCACCGG GACGGTCCTT GTGCAGTACG GGATGGCGGC TGCGTACGCA GTGGTCGTCT ATAAGGCGGC GCGTAAATAT GATGCGCCGC TCAAGCCAGA CTTCGAGGGG ATCAAGCAGG CCGCGACCGC CTCGATCCCC TTGCTGATCC GCACGATACT GCTGCGCATC GCACTGCTTG CCGGGACGAT CCTTGCCGCG CGCTATGGGA CGGAAGCACT GGCGGCACAA CAGGTCGCAT GGTCCCTATG GGGTTTCCTA GGGCTGGTGC TGGACGCGCT GGCGATCGCC GGGCAGGCGT GGATCTCGCA GTTGCTCGGG GCGTCGGACG TAGCGGGCGC GCGGCGGGCG ACGCGCCGGA CGATCGAGTG GGGCGTGGTG CTCGGCGTGC TGCTCGCCCT GGTGGTGCTG GCGACGCGGC AAGGGTTCAT CCCGCTGTTC ACCGAGGATC AGACGGTCCG GAATCTGCTG GAGGACGTGC TGCTGCTGGA GGCGCTGTTC CTGCCGATCG CCGCGCCGGT GTTCGTCCTC GACGGCCTGC TCATCGGCGC CGGCGACGGC CGGTTCCTGG CGTGGGCCGG CATCGCGACC ACCAGCGCCT ACCTGGCCGC CGCGCTCGGT TCGTACCACC TGGACCAAGG GCTGACCGGC TTGTGGTGGG CCCTCGGGGT GTTCATGCTC GCGCGCCTCA TCGCGCTCGG GACACGCATC CGGACCGACC AGTGGATCGT GACCGGCGCC GATCGCGGCG CGAGCGGTGC GGGAACGGAG GACGCGACAG CCGCCGCGGA GGTCGCGGCG GTGACGCAGA CGCCTTAG
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Protein sequence | MTSEHSFRPT AEDARLLKLA LPALGNLVAE PLFLLADSAI VGHLGTPQLA GLAAASALLA TLTYLCVFLA YGTTAAVGRR IGAGDLPGAV RQGVDGMWLG VILGVVLGLA GIVFAAPLVR VFGASPEAVP YGVTYLRIAS IGQPAMLLVL ASTGVLRGLQ DIRTTLVVAA TGAGMNVVLN LVLVYPVGMG IAGSATGTVL VQYGMAAAYA VVVYKAARKY DAPLKPDFEG IKQAATASIP LLIRTILLRI ALLAGTILAA RYGTEALAAQ QVAWSLWGFL GLVLDALAIA GQAWISQLLG ASDVAGARRA TRRTIEWGVV LGVLLALVVL ATRQGFIPLF TEDQTVRNLL EDVLLLEALF LPIAAPVFVL DGLLIGAGDG RFLAWAGIAT TSAYLAAALG SYHLDQGLTG LWWALGVFML ARLIALGTRI RTDQWIVTGA DRGASGAGTE DATAAAEVAA VTQTP
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