Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Caci_1440 |
Symbol | |
ID | 8332779 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Catenulispora acidiphila DSM 44928 |
Kingdom | Bacteria |
Replicon accession | NC_013131 |
Strand | + |
Start bp | 1640670 |
End bp | 1641512 |
Gene Length | 843 bp |
Protein Length | 280 aa |
Translation table | 11 |
GC content | 72% |
IMG OID | 644954588 |
Product | type I phosphodiesterase/nucleotide pyrophosphatase |
Protein accession | YP_003112204 |
Protein GI | 256390640 |
COG category | [R] General function prediction only |
COG ID | [COG1524] Uncharacterized proteins of the AP superfamily |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 0.0855011 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 34 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACCTCTC CTTCCCGTGT CCTCGTCATC GGCATCGACG GGGTGCGTCT CGACGTGCTC CGCAGCGTGG CGACGCCGCA TATCGACGCG GTCGCCGCCG AGGGCTTCCT GGCGCCGGTG CGGATCGACG ACGCGACGCC GACCTGGTCC GGTCCGTGTT GGGCGACGAT CGCGACCGGG GTCTCGGCGG CGAAGCACGG GATCATGCAC AACGTCTTCA CCGGGCACCG GCTCACGGAG TATCCGGACT TCCTGACGCT GGCCTCGCTC GCGGGGAAGC GGACGTACCT GTCGGTCGGG AGCTGGGAGC CGCTGGCGAC GGCGGCGTGC GGGGGACCGT TGTTCGCGGC GCCGGACCGG GTGACGTTCA CGTCCTACGG GCTGGACTGC GAGCGCGGGG ACGAGGCGGC GACGGTCGAC GCCGAGCGGG AGATGCTGGC GGCGGACTAC GACGTGGCGT TCGTGTATCT GGGGGACGTC GACGAGACCG GGCACGAGCT CGGGGTCGGC GCCGAGTACC GCGCGGCGGT GGAGCGTGCC GACGCGCGGG TCGGACGGCT GGTGGCGACG GTGCGGGCGC GCGCGGCGTA CGCCGCGGAA CGGTGGACGG TGATCGTGGT GACGGACCAC GGTCACGTCG ACGAGGGCGG CCACGGCGGC GACAGCGATC TGGAGCGCAC GGCGTGGATC GCCGCCAGCG GGCCGGGGAT CGCGGCGGGC GCGGAGATGG GGACGCTGCG GCATGTGGAC GTCGCGGCGC ATGTGTATGA GGCGGTCGGG CTGAGCGAGG CGATGGCGGG GCTTCCTTTG GAGGGGAAGC CTTTTGGGGC GGTCTCGGTC TGA
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Protein sequence | MTSPSRVLVI GIDGVRLDVL RSVATPHIDA VAAEGFLAPV RIDDATPTWS GPCWATIATG VSAAKHGIMH NVFTGHRLTE YPDFLTLASL AGKRTYLSVG SWEPLATAAC GGPLFAAPDR VTFTSYGLDC ERGDEAATVD AEREMLAADY DVAFVYLGDV DETGHELGVG AEYRAAVERA DARVGRLVAT VRARAAYAAE RWTVIVVTDH GHVDEGGHGG DSDLERTAWI AASGPGIAAG AEMGTLRHVD VAAHVYEAVG LSEAMAGLPL EGKPFGAVSV
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