Gene Caci_1399 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCaci_1399 
Symbol 
ID8332737 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCatenulispora acidiphila DSM 44928 
KingdomBacteria 
Replicon accessionNC_013131 
Strand
Start bp1587776 
End bp1588885 
Gene Length1110 bp 
Protein Length369 aa 
Translation table11 
GC content66% 
IMG OID644954547 
Producthypothetical protein 
Protein accessionYP_003112163 
Protein GI256390599 
COG category[F] Nucleotide transport and metabolism 
COG ID[COG0208] Ribonucleotide reductase, beta subunit 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.270012 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones36 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGACCACCC ATGACCTCTA CACCCTCCCG GCCGACCACG AGACCTGGGA CGTCGCGAAC 
ACCGGCTACT CCCGCTTCTC CTGGGAGTAC GACAACGGCC GCGACCGCCT CCTTCGCCTG
TACCAGAAGG GCAAGGACAA GCAGTGGGAC CAGGTGACCC GCATCGACTG GGACATCGAG
GTCGACCCCG ACGACATCCT GGGCTTCCCG CACGAGACCT CGCCCCTGTT CGGCTCGGAG
ATCTGGGACA AGATGACCCC CGAGCAGCAC AACGAGCTCG GCCGCCACCA GGTCGCCTGG
CAGTTCTCGA ACTTCCTGCA CGGCGAGCAG GGCGCGATGA TCTGCTCGGC CCGCATCGTG
GAGTCCGTCC CGGACCTGGA CGCCAAGTTC TACGCCGCCA CCCAGACCAT GGACGAGGCC
CGCCACGCCG AGGTCTACAG CAGGTTCTTG AAGGAGAAGG TGGGCCTGTT CTACCCGATC
AACGACCAGC TCAAGGCCCT CCTGGACGAC ACCCTGTCCG ACTCCCGCTG GGACATGCCC
TACCTGGGCA TGCAGGTCCT CATCGAAGGC CTGGCCCTGG CCGCCTTCGG CGTCATGCGC
GACCTGACGG ACATGCCGCT GCCCAAGCAG ATCCTCGCCT ACGTGATGCA GGACGAGGCG
CGCCACGTCG CATTCGGCCG TCTGGCCCTG CGCGACTTCT ACAAGGAACT CAGCCAGGCC
GAACGCGACG AACGCGAGGA ATTCGTCGTC GAGGGCTGCT ACCTGATGCG CGACCGCATC
AACGGCCGCG ACGTCTACGA ACACCTCGGC CTCCCCGTCG AGCGCTGCCT GGAGCTCAAC
GAGCACTCCG AGTACTACAC CGCCTTCCGC AACCTGCTGT TCACCCGCAT CGTGCCCACC
GTGAAGGACA TCGGCCTCTG GGGACCCCGC GTCCAGAAGG CCTACGAGGA CATGGGCGTC
CTGAACTACG CCGCCTCCAA CGTCGAGGAC CTGATGAAAG CCGACGAGGA CCTCGCCGAA
CGCCTGGACC GCGAGAAGCG CTTCGCCGCC GAGGAGGCGG CGCGCGCCGC AGATGTGGAC
GCGACCATCG CTGCGGGGGA GGGGGAGTAG
 
Protein sequence
MTTHDLYTLP ADHETWDVAN TGYSRFSWEY DNGRDRLLRL YQKGKDKQWD QVTRIDWDIE 
VDPDDILGFP HETSPLFGSE IWDKMTPEQH NELGRHQVAW QFSNFLHGEQ GAMICSARIV
ESVPDLDAKF YAATQTMDEA RHAEVYSRFL KEKVGLFYPI NDQLKALLDD TLSDSRWDMP
YLGMQVLIEG LALAAFGVMR DLTDMPLPKQ ILAYVMQDEA RHVAFGRLAL RDFYKELSQA
ERDEREEFVV EGCYLMRDRI NGRDVYEHLG LPVERCLELN EHSEYYTAFR NLLFTRIVPT
VKDIGLWGPR VQKAYEDMGV LNYAASNVED LMKADEDLAE RLDREKRFAA EEAARAADVD
ATIAAGEGE