Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Caci_1398 |
Symbol | |
ID | 8332736 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Catenulispora acidiphila DSM 44928 |
Kingdom | Bacteria |
Replicon accession | NC_013131 |
Strand | + |
Start bp | 1587175 |
End bp | 1587756 |
Gene Length | 582 bp |
Protein Length | 193 aa |
Translation table | 11 |
GC content | 73% |
IMG OID | 644954546 |
Product | transcriptional regulator, TetR family |
Protein accession | YP_003112162 |
Protein GI | 256390598 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 0.211037 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 37 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGGGTTCCG CTCGTGAAGC ACTGCTGGAC GCCGCCTACG AGACCATCGT CGCCGGCCTG TGGTCCAGCG CCCGCATGGC CGACCTCGCG GCGCGCGCCG GCGTCTCGCG CCAGACCCTG TACAACGAGT TCGGGAACCG CGACCAGCTC GCCGCCGCCC TGGCGCTGCG CGAGGCCGAG CGGTTCCGGG AGCTGACCGG GCACGCGGCC CGCACCGCGC CCGGCGACAT CGGCGCCGCC ACCGCGGCCT CGGTGACCGC CGCGCTCACC GCCGCCCGCG ACAACCCGTT GATCAAGGCC ACCCTCACCG ACGACACCTC GGGCCTGCTG CCGTACCTGA CCACGCGCTC CGCGGCGATC ATGGACGTCT TCCGCGAGGA CTCGATCGCG GTGTTCACCG AGCGCTGGCC GGAGCTCGCC GAGCGGCCCG AGGTCCGCGC CGAGGTGGGC TGGATCTGCG AGACCGCCTT CCGCCTGGTG ATCAGCCACC TGATCATCGC GACCGAGCCG GTCCAGACCA CCAGCGCGCA CATCGCCGAA GTGGTCCGCC GCCTGATGAG GGACCTCACG ACGAACGAGT GA
|
Protein sequence | MGSAREALLD AAYETIVAGL WSSARMADLA ARAGVSRQTL YNEFGNRDQL AAALALREAE RFRELTGHAA RTAPGDIGAA TAASVTAALT AARDNPLIKA TLTDDTSGLL PYLTTRSAAI MDVFREDSIA VFTERWPELA ERPEVRAEVG WICETAFRLV ISHLIIATEP VQTTSAHIAE VVRRLMRDLT TNE
|
| |