| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Caci_1327 |
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| Symbol | |
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| ID | 8332662 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Catenulispora acidiphila DSM 44928 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013131 |
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| Strand | - |
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| Start bp | 1506091 |
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| End bp | 1508289 |
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| Gene Length | 2199 bp |
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| Protein Length | 732 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 644954473 |
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| Product | Ricin B lectin |
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| Protein accession | YP_003112092 |
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| Protein GI | 256390528 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.12568 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 38 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGGAACCTG CCTTGAGAAT CCGCGTCTCC ACCGCCGGGT TCGGCGCGCT CGTCCTGACG
GCGGGCCTGC TGACCTTCGG CCAAGTGGCG GCGGCGCCCA AGGCGCACGC CGCCGACCCG
GTCGGCCCGA TCACCGGTTA CCAGGGCCTG TGCCTGGACG ACCGCTCGGC CTCGACCGCC
AACTTCAACC CGGTGCAGGT CTACACCTGC AACGGCAGCA GCGCGCAGAG CTGGACCGTC
GGCAGCGCGG GCAACACGTT GCAGGTCCTC GGCAAGTGCC TGGACGTCAA CGCGGCCGGC
ACCGCCAACG GGACCGCCGT CGACCTCTAT GACTGCAACG GATCCGGCGC TCAGGTCTGG
GTCCCGCAGT CCAACGGCGA GCTGCTGAAC CCCAACTCCG GCAAGTGCCT GGACGACACC
GGCTTCGGCG GCTCCGGGAC GCAGGTCCAG ATCTGGGCCT GCGCCGACAG CGCCAACCAG
CAGTGGGCGG TGCCGACCGG CGGCGGCGGC GGGGGCGGGG GCGGCGGGGG CATCCCGCAC
CCGGACTTCG GTCCGAACGT CACCGTCTTC GACCCGTCGA TGTCGACCTC GACCATCCAG
GGCGACATCA ACAGCGTCTA CAACTCTCAG GTGAACAACG AATTCGGCAC GCAGCGCAAC
GCTCTGCTGT TCGCGCCGGG CTCGTACAAC GTCGACATCC CCGTCGGATA CAACACCGAA
GTCGCAGGGC TCGGACTCTC CCCGGACGCG GTGAACATCA CCGGCGGCAC CGTCCACGTC
GCCGGCCACA CCGCCGACGG CAACGCCACC CAGAACTTCT GGCGCGACGC GGAGAACATG
GAAGTCAGCC CGCCCTCGGG CAGCACGATG TGGGCCGTCT CCCAGGCCGA CCCGTTCCGG
CGCATGGACG TCAAGGGCAG CATGCTGCTC TACGACAACA TCCACGGCAG CGGCGGCAAC
TGGTCCAGCG GCGGCTACGT CGGCGACTCG CGGATCAGCG GGCAGATCAA CTCCGGCACG
CAGCAGCAGT TCCTGACGCA GAACACCGCG ATGAACGGCG GCTGGACCGG CTCGAACTGG
AACATGGTCT TCGTCGGCGA CACCAACGCC CCGGCGAACA CGTTCCCGAA CCCGCCGGAC
ACCACCGTCG CGCAGACCCC GGTGAACCGG GAGAAGCCGT TCATCTACGT GGACGCCAGC
GGCACCTGGC AGGTGTTCGT CCCCGCGCTC CGGACGAACG CGCAGGGCCC TGACTGGACG
AACGGCACAC CGGCCGGCAC GTCCATCCCG GTCAGCCAGT TCTACATCGT CAAGCCGGGC
GACACCTCCG CCACGATCAA CGCCGCGCTG TCGGCGGGCA AGAGCCTGAT CGTGACGCCG
GGTGTCTACC ACCTGTCCTC GGCGCTGAAC ATCACCAGCC CGAACACCGT GGTGCTGGGT
CTGGGCCTGG CGACGCTGGT GCCGGACAAC GGCAACGCCG CGATCACCAC GGCCGACGTG
GACGGCATCG ACATCGCCGG GCTGCTGATC AGCGCCAACT CCACCAACTC CGCGGTCATG
ATGCAGATCG GTCCCAACGG TTCGACCGCG AGCCACGCGG CGAACCCGAC CGAGCTGCAG
GACGTCTTCT TCCGTATCGG CGGCGACCAG GTGGGCAAGG CCACGCAGGC ATTGGTGGTG
AACAGCAACA ACGTGATCGG CGACGACCTG TGGCTGTGGC GCGCCGACCA CACGAACGGG
GTCGGGTGGA CCGTGAACCC GGCGCAGAAC GGGCTCGTGG TCAACGGGAA CAACGTGACC
ATGTACGGGC TCGCGGTCGA GCACTTCGAG AAGTACCAGA CCGAGTGGTT CGGGAACGGC
GGGCGGACTT ACTTCTACCA GAGTGAGACT CCGTACGACG TGCCGAACCA GGGCAGTTGG
GTGCCGCCCA ACGGCGCCAC CGGGTACGCC TCGTACCTGG TCGGGCCTTC CGTCACGTCG
CACCAGGCGT GGGGGTTGGG GGTCTACGCG TACTTCCCGG TCAACCCCTC GATGGTGCTG
GACCACGCGA TCGAGACGCC GACCACGTCG GGCGTCGCGT TCCACGACAT GGTCACGACC
GTGCTCGGCG GCGACGGAAC GCTCAACCAC CAGGTGAACG AGACCGGTGG GCAGGTCACG
CCCAGCCACA ACGCCAGTTA CCTGGTGAGC TACCCGTAG
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| Protein sequence | MEPALRIRVS TAGFGALVLT AGLLTFGQVA AAPKAHAADP VGPITGYQGL CLDDRSASTA
NFNPVQVYTC NGSSAQSWTV GSAGNTLQVL GKCLDVNAAG TANGTAVDLY DCNGSGAQVW
VPQSNGELLN PNSGKCLDDT GFGGSGTQVQ IWACADSANQ QWAVPTGGGG GGGGGGGIPH
PDFGPNVTVF DPSMSTSTIQ GDINSVYNSQ VNNEFGTQRN ALLFAPGSYN VDIPVGYNTE
VAGLGLSPDA VNITGGTVHV AGHTADGNAT QNFWRDAENM EVSPPSGSTM WAVSQADPFR
RMDVKGSMLL YDNIHGSGGN WSSGGYVGDS RISGQINSGT QQQFLTQNTA MNGGWTGSNW
NMVFVGDTNA PANTFPNPPD TTVAQTPVNR EKPFIYVDAS GTWQVFVPAL RTNAQGPDWT
NGTPAGTSIP VSQFYIVKPG DTSATINAAL SAGKSLIVTP GVYHLSSALN ITSPNTVVLG
LGLATLVPDN GNAAITTADV DGIDIAGLLI SANSTNSAVM MQIGPNGSTA SHAANPTELQ
DVFFRIGGDQ VGKATQALVV NSNNVIGDDL WLWRADHTNG VGWTVNPAQN GLVVNGNNVT
MYGLAVEHFE KYQTEWFGNG GRTYFYQSET PYDVPNQGSW VPPNGATGYA SYLVGPSVTS
HQAWGLGVYA YFPVNPSMVL DHAIETPTTS GVAFHDMVTT VLGGDGTLNH QVNETGGQVT
PSHNASYLVS YP
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