Gene Caci_1250 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCaci_1250 
Symbol 
ID8332585 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCatenulispora acidiphila DSM 44928 
KingdomBacteria 
Replicon accessionNC_013131 
Strand
Start bp1416818 
End bp1417771 
Gene Length954 bp 
Protein Length317 aa 
Translation table11 
GC content72% 
IMG OID644954397 
Productputative cellulose-binding protein 
Protein accessionYP_003112016 
Protein GI256390452 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones28 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCGACA TGCATTCGCC GCACGGCTTC GAGCAAGTGC GCCGCGGGTA CGACCCGGTC 
CAGGTCAACG ACCGAATCAC CAAGCTGATC GCCGAGCGCG ACGCGGCGCA TTCGCGCTCG
ACGTCCATGG AGAAGCGCAT CGAGGAACTC CACCTGGAGA ACCAGACGGT GCAGGCGCAG
CTGGCCGACA GCGAGCCCAG CTACGCCGGT CTCGGTGCGC GCGTGGAGAA GATCCTGCGC
CTGGCCGAGG AGGAGGCCAA GGACCTGCGC GAGGAGGCCC GCCGCGCCGC CGACGCGCAC
CGCGAGCTCG CCGACCAGGC CGCGATGAAG GTCCGCACCG ACGCCGAGCA GTACGCCAAG
GACCGCAAGG CCAAGGCGGA CGAAGAGGCC GTGCGGATCG TCGAGAAGGC CAAGGACGAC
GCCAACCAGG TCCGCGCCAC CGCCGCCAAG GACGCGGCGA CCAAGCGCGA GGAGGCCGAG
GCGCTCTTCG AGGAGACCCG CGCCAAGGCC GCGGCGGCCG CCACCGACTT CGAGACCAAG
CTGGCCAAGC GCCGCGAGCA GTCCGAGCGC GACCTGGCCG CCCGCCAGGC CAAGGCCGAG
AAGCGCCTGG CCGAGATCGA GAACCGGGCC GAGCAGCTGC GCCTGGAGGC CGAGAAGATG
CGCACCGACG CCGAGCGCCG CGCGCGCTCG ACGATCGAGA CCGCGCAGCG CCAGGCCGAC
GACATCATCG CCGACGCGCG CAGCAAGACC GACCGCATCC GCAGCGAGGC CGAGCGCGAG
CTGGCGGCGC TGACCCACCG CCGCGACAGC ATCAACGCCC AGCTGCACAA CGTGCGCGAG
ATGCTGGCCA CCCTGACCGG CGGCGCGGTG AACGTCAACG CCCTGGCCGG GCTGACGGAG
GCCGAGGAGG AGCTGGAGAA GGACGACGAG GCTTCGATCC CGGCGCAGCG CTAG
 
Protein sequence
MSDMHSPHGF EQVRRGYDPV QVNDRITKLI AERDAAHSRS TSMEKRIEEL HLENQTVQAQ 
LADSEPSYAG LGARVEKILR LAEEEAKDLR EEARRAADAH RELADQAAMK VRTDAEQYAK
DRKAKADEEA VRIVEKAKDD ANQVRATAAK DAATKREEAE ALFEETRAKA AAAATDFETK
LAKRREQSER DLAARQAKAE KRLAEIENRA EQLRLEAEKM RTDAERRARS TIETAQRQAD
DIIADARSKT DRIRSEAERE LAALTHRRDS INAQLHNVRE MLATLTGGAV NVNALAGLTE
AEEELEKDDE ASIPAQR