Gene Caci_1246 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCaci_1246 
Symbol 
ID8332581 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCatenulispora acidiphila DSM 44928 
KingdomBacteria 
Replicon accessionNC_013131 
Strand
Start bp1413504 
End bp1413848 
Gene Length345 bp 
Protein Length114 aa 
Translation table11 
GC content67% 
IMG OID644954393 
Producthypothetical protein 
Protein accessionYP_003112012 
Protein GI256390448 
COG category[S] Function unknown 
COG ID[COG3860] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones28 
Fosmid unclonability p-value0.898285 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGAAGACA CAGCCACGGA CGACAAACAA GAGTCCCGAT CACGCCAGCC CGCCGACCGG 
GGTTCGGGGA GTACCGACCC GCAGATCATC CAGTGCTACA GCCGTGGCCG GGTGGTGCAG
ATGCCGTCGT TGCGCGGCCG GAGCCAGGGG TTGCGCGATC GGTTGCTGGG GCACATCGCC
GCGCGGGCCT TCGAGCCGGG GCGGGCGTAT ACCGAGCAGG AAGTCAACGC GGCGTTGATG
TCAGTCTTCG ACGACTACGT CGCGCTGCGC CGGTACCTGG TCGAGAGTCG GCACCTCATG
CGGGATCAGG CTGGGCGGGA GTATCGGCTT CCGGATCCGG CGTAG
 
Protein sequence
MEDTATDDKQ ESRSRQPADR GSGSTDPQII QCYSRGRVVQ MPSLRGRSQG LRDRLLGHIA 
ARAFEPGRAY TEQEVNAALM SVFDDYVALR RYLVESRHLM RDQAGREYRL PDPA