| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Caci_1142 |
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| Symbol | |
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| ID | 8332477 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Catenulispora acidiphila DSM 44928 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013131 |
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| Strand | - |
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| Start bp | 1289464 |
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| End bp | 1290084 |
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| Gene Length | 621 bp |
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| Protein Length | 206 aa |
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| Translation table | 11 |
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| GC content | 74% |
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| IMG OID | 644954290 |
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| Product | transcriptional regulator, TetR family |
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| Protein accession | YP_003111909 |
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| Protein GI | 256390345 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 0.759817 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 47 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGGCACGCG CCGGGCTGTC CCCCGAGGTG CTCGTGACCG CGGCCGCCGA GCTGGCCGAC
GAGATCGGCT TCGAGAACGT CACGATCGGG GTGGTGGCGC GGCGGTTCGG GGTGCGGGAA
CCGAGCCTGT ACTCGCATAT CCGCAACGCG AACGACCTCC GGGTCCGGGT CGCCGCCAAG
GCGCTCGGCG ACCTCGCCGA CCAGCTCTCC GAGGCCTTGG CCGGACGCTC GGGACGCGAG
GCGCTGCTCG CCTTCGCCGC CGCCTACCGC GACTACGGCA GGGACCACCC CGGCCGGTTC
ACCGCCGCGC GCATGCCCTT CCCGCTCGAC TCCCCCGCCG CCGACGCCGC GCGCCGGCAC
TCGGAGCTCA CGCGCGCCCT GCTGCGCGGC TACGCCCTCG GCGAGCCCGA CGAGACCGAC
GCGGTGCGGC TGCTCGGCGC GACGATCCTG GGGTTCGTCA CCTTGGAGGC CGGCGGTTCC
TACCGGCACC ACCCGCGCAG CGCCGACGCG TCGTGGAACG CCGCGATGGA CGCGCTCGAC
GTGGCGCTGC GGAACTGGCC GACGGCAGAG GAAAAAGCGT CGGCCGGGGC GAAGTCCCCC
AAGCCTGGGA AAGACTTGTA G
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| Protein sequence | MARAGLSPEV LVTAAAELAD EIGFENVTIG VVARRFGVRE PSLYSHIRNA NDLRVRVAAK
ALGDLADQLS EALAGRSGRE ALLAFAAAYR DYGRDHPGRF TAARMPFPLD SPAADAARRH
SELTRALLRG YALGEPDETD AVRLLGATIL GFVTLEAGGS YRHHPRSADA SWNAAMDALD
VALRNWPTAE EKASAGAKSP KPGKDL
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