Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Caci_1085 |
Symbol | |
ID | 8332420 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Catenulispora acidiphila DSM 44928 |
Kingdom | Bacteria |
Replicon accession | NC_013131 |
Strand | + |
Start bp | 1229251 |
End bp | 1229757 |
Gene Length | 507 bp |
Protein Length | 168 aa |
Translation table | 11 |
GC content | 70% |
IMG OID | 644954233 |
Product | Cupin 2 conserved barrel domain protein |
Protein accession | YP_003111852 |
Protein GI | 256390288 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG0662] Mannose-6-phosphate isomerase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 24 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 31 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGACCACGC ACCTGCCTGT TGTCGTCAAC GTCGCCGACG CGCCGTCGAA CCGCCGCCGC GGCGGTGATC TGCGGGCGAT GCTCACGCCG TCCGCCGTCG GCGCGACGAG CGGCTTCATG GGACTGGCCA TCGTCGAGCC GGGCGAGCGC ATCGGCGAGC ACTACCACCC CTACTCCGAG GAGTTCGTCT TCGTCGTCTG CGGCGAGCTG ATGGTCGATC TGGACGGCGT GCCGCAGCCG CTGCACGCCG ACCAGGGCAT GATGATCCCG ATCGGCATGC GCCACCGGTT CCGCAACGTC GGCACGACCG AGGCGCGCCT GGTGTTCCAC CTCGGTCCGC TGGCTCCGAG GCCGGAGCTC GGCCACGTGG ACACCGAGCA GACCGAACAG ACCGAACAGA CCGAACAGAT CAAGCAGGCC GAACAGACCA TCGAGCAGCC GGTCCACCGG CACGTCGGCC AGCCGCCGCA CGCGGACGCG CCCGAACCCG CGGAGGCCGT CCGATGA
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Protein sequence | MTTHLPVVVN VADAPSNRRR GGDLRAMLTP SAVGATSGFM GLAIVEPGER IGEHYHPYSE EFVFVVCGEL MVDLDGVPQP LHADQGMMIP IGMRHRFRNV GTTEARLVFH LGPLAPRPEL GHVDTEQTEQ TEQTEQIKQA EQTIEQPVHR HVGQPPHADA PEPAEAVR
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