Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Caci_1035 |
Symbol | |
ID | 8332370 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Catenulispora acidiphila DSM 44928 |
Kingdom | Bacteria |
Replicon accession | NC_013131 |
Strand | + |
Start bp | 1176756 |
End bp | 1177796 |
Gene Length | 1041 bp |
Protein Length | 346 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 644954183 |
Product | hypothetical protein |
Protein accession | YP_003111802 |
Protein GI | 256390238 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 9 |
Plasmid unclonability p-value | 0.0174734 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 15 |
Fosmid unclonability p-value | 0.00616625 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGCGTCATC TCTCCCGCCT GCGAACGCAA GCACTGGCCG TGACATTCGC GCTGAGTGCG GCCGCACTGA TGCCCTCGGG CTCCGCCACG GCGGCAGACT CGTATCAGTG GGCTGCGTTG GGCGACTCGT ACACCGCCGG CGGCTTCGTC GGGGACCCGC AGCCCGCGCT CGGTGATGCC TCACGCGACG GCTGCGACCG CACCACCAAC GCCTACCCCG ACGTCGTCGA CCGAGAGCTC GCCAAGTTCC CGCCAGGCAA GCCCGTCCAC CTGACCAACG TCAGCTGCGG CAACGCCACC ATCGCCGACA TCGCCAACGA GAAGCAGACC CCGATCAGTC CCGTCCAGCC CCCCGCCGGC GGCTGGCCCG CGGTGGACTC GCAGATCCAG CGGGCCCATC TGGGTGAGGA CACCGACGTC GTCACGGTCG GCATCGGCGG CAACAGCCTG CCCTTCGGCG ACATCCTGCT CAAGTGCGTC GAGCTGGGCA CGGCCGGCAA CTCCTGCCGC GACTACTACA CCAACCCCCC GGAGGGGGTG GAGAGCATGC AGGACAGACT CGCCCGAGTT CAGGACGAGT ACATCGAGAT GCTCGCCAAG GTGCACCAGG CCGCACCCCA CGCCAAGGTG ATCACCGTCG GCTACCCGGC AGTCCTGCCT GAGGACAGCA GTGATTGCAA GCGCTTCGAC TTCACCAAGC TGGGCCCGGT CACCCACGCC GATATCGACT GGCTCCGCGG CAGCGTCCTC GAGCAGCTGA ACAACACGAT CCAACGGGTG TCGGGCTTCT TCGGCGACCG TTACGTCGAT GTCTACTCCT CCAGCATCGG CCACGATGCC TGCCAGCCCG AGCACACCAA GTGGGTCGAA GGAATCTGCG GCAACGCTGA GGACTACTGG CCCGCCAGCC TTCCCGGCAC CCTGCTGAAC TGCGCTCTGC TCAGCAAGCG CGTCACCCTC GTCCACCCCA ACGCCGCCGG ATACGCCAAC ACCGCAGCTC ATGTGGAACG AGCGATCCGC ATCGCCTTGC TCGAACGCTA G
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Protein sequence | MRHLSRLRTQ ALAVTFALSA AALMPSGSAT AADSYQWAAL GDSYTAGGFV GDPQPALGDA SRDGCDRTTN AYPDVVDREL AKFPPGKPVH LTNVSCGNAT IADIANEKQT PISPVQPPAG GWPAVDSQIQ RAHLGEDTDV VTVGIGGNSL PFGDILLKCV ELGTAGNSCR DYYTNPPEGV ESMQDRLARV QDEYIEMLAK VHQAAPHAKV ITVGYPAVLP EDSSDCKRFD FTKLGPVTHA DIDWLRGSVL EQLNNTIQRV SGFFGDRYVD VYSSSIGHDA CQPEHTKWVE GICGNAEDYW PASLPGTLLN CALLSKRVTL VHPNAAGYAN TAAHVERAIR IALLER
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