Gene Caci_0947 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCaci_0947 
Symbol 
ID8332281 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCatenulispora acidiphila DSM 44928 
KingdomBacteria 
Replicon accessionNC_013131 
Strand
Start bp1089673 
End bp1090056 
Gene Length384 bp 
Protein Length127 aa 
Translation table11 
GC content70% 
IMG OID644954100 
Productribosomal protein L18 
Protein accessionYP_003111720 
Protein GI256390156 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0256] Ribosomal protein L18 
TIGRFAM ID[TIGR00060] ribosomal protein L18, bacterial type 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.0241036 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones32 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCTTTCG CAGTCAAGAT CGGCAAGGGT TCGGCGAAGA AGCGCAACGC TGTCAAGCGT 
CGCCATCTGC GCGTCCGCAA GAAGGTCTCC GGTACCGCGC TCCGTCCGCG CCTGGTGGTC
ACCCGCTCCG CGCGCCACAT GGTCGCGCAG GTCGTGGACG ACGTCACCCG CGTGACGCTG
GCTTCGGCCT CCACCATGGA GTCCGGCCTG CGCACCGGCG ACGGCGACAA GACCGCCAAG
GCCAAGGAAG TCGGCAAGCT CGTCGCCGAG CGGGCCAAGG CCAAGGGTGT CGGCACGGTC
GTCTTCGACC GCGGCGGCAA CAAGTACCAC GGCCGGGTGG CCGCGGTGGC CGACGGCGCC
CGGGAAGCAG GGCTGGAACT GTGA
 
Protein sequence
MAFAVKIGKG SAKKRNAVKR RHLRVRKKVS GTALRPRLVV TRSARHMVAQ VVDDVTRVTL 
ASASTMESGL RTGDGDKTAK AKEVGKLVAE RAKAKGVGTV VFDRGGNKYH GRVAAVADGA
REAGLEL