Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Caci_0943 |
Symbol | |
ID | 8332277 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Catenulispora acidiphila DSM 44928 |
Kingdom | Bacteria |
Replicon accession | NC_013131 |
Strand | + |
Start bp | 1087852 |
End bp | 1088424 |
Gene Length | 573 bp |
Protein Length | 190 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 644954096 |
Product | ribosomal protein L5 |
Protein accession | YP_003111716 |
Protein GI | 256390152 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0094] Ribosomal protein L5 |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 0.125126 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 33 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACCGTGA CTGAGACTGA GACCTCGGTG CAGCCGCGTA TGAAGCTGCG CTACCGCTCG GAGATCGCCC CGGCGCTCAA GGAGCAGTTC GGCTTCCCGA ACGTCATGCT GATCCCCGGT CTGACCAAGA TCGTCGTCAA CATGGGTGTG GGCGACGCCG CCCGCGACTC CAAGCTGATG GACGGCGCCG TCCGCGACCT CGCGGCGATC ACCGGCCAGA AGCCGACCGT GACCCGGGCC CGCAAGTCCA TCGCGCAGTT CAAGCTGCGC GAGGGCCAGC CCATCGGCGC GCACGTGACG CTGCGCGGCG ACCGGATGTG GGAGTTCTGC GACCGGCTGG TGTCGATCGC GCTTCCCCGT ATCCGCGACT TCCGTGGCCT GTCGCCCAAG CAGTTCGACG GCCGGGGCAA CTACACGTTC GGTCTGAACG AGCAGTCGAT GTTCCACGAG ATCGACCAGG ACAAGATCGA CCGAGTGCGC GGCATGGACA TCACCGTCGT GACCACCGCC CGCAACGACG ACGAGGGTCG CGCCCTGCTG CGCCTCCTCG GTTTCCCGTT CAAGGAGGCG TGA
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Protein sequence | MTVTETETSV QPRMKLRYRS EIAPALKEQF GFPNVMLIPG LTKIVVNMGV GDAARDSKLM DGAVRDLAAI TGQKPTVTRA RKSIAQFKLR EGQPIGAHVT LRGDRMWEFC DRLVSIALPR IRDFRGLSPK QFDGRGNYTF GLNEQSMFHE IDQDKIDRVR GMDITVVTTA RNDDEGRALL RLLGFPFKEA
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