Gene Caci_0833 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCaci_0833 
Symbol 
ID8332163 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCatenulispora acidiphila DSM 44928 
KingdomBacteria 
Replicon accessionNC_013131 
Strand
Start bp968641 
End bp969534 
Gene Length894 bp 
Protein Length297 aa 
Translation table11 
GC content73% 
IMG OID644953984 
Product2-dehydropantoate 2-reductase 
Protein accessionYP_003111608 
Protein GI256390044 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG1893] Ketopantoate reductase 
TIGRFAM ID[TIGR00745] 2-dehydropantoate 2-reductase 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones10 
Fosmid unclonability p-value0.0000476059 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGGCGGACA TAGCGGTGGT GGGGCCTGGC GCTATCGGTT CGGTCGCGGC GTTGGCCGCG 
CAGCAGACCG GGAGGCACTC CGTGACGCTG TGCGCGCGGC GTGATCCCGG GGCGCTGCGG
GTGGTCGACG ACGTCTCCGG CGGGGTGACC GACCTGGAGG CGCCGATCCT GACCTCCCCG
GCCGAGGTGA CCGGGCCGGC CGACTGGGTG CTGCTGGCGG TGAAGGCGCA CCAGACCGAC
GGCGCCGCCG GGTATCTGGA CGCGCTGTGC AAGCCGAGCA CGACGGTCGT GGCGCTGCAG
AACGGCGTCG AGCACGTCGA GCGCGTCGCG CCGTACGTGA ACGACGCGCA GGTGCTCCCG
GCCATCGTCT GGATCAGCGC CGAGCCGACC GGACCCGGCG AGGTCACGGT CCGCAACAAC
ATCTCCTCGC TGCTGCAGGT CCCGGCCGGA CCCGCCGGCG AGGAGTTCGC GCGGCTGCTG
GAAGGCGCCT CGGCGGTCGA GGTGGAGCTG GTCTCGGACT TCACCACCGC GGCCTGGCGC
AAGCTGACGA CCAACGCCAT CGCCGGCGTG ATGGCGGTGA CCGGCCGGCG CGCGGCGATC
TATCAGCGCC CGGATGTCCG GGAACTGGCT CTGGCGCTGG CACAGGAGAC GCTGGCGGTG
GCCCGGGCCG AAGGCGCGGC GCTGCCGGAG AGCGAGGCCG AGGCGCTGGT CGGCATCTTC
GAGCGGATGG ACCCCGACAT CGGGTCCTCG ATCCTGTTCG ACCGGCTCGC CGGCCGGGAG
CTGGAGTGGG ACGCGCGCAA CGGCGTGGTG CGCCGTCTGG GGCGGCGGCA CGGGATCCCG
ACGCCGGTGT CCGACGTTCT GGTCCCGCTG TTGTCCGCCG CCTCAGACGG CTGA
 
Protein sequence
MADIAVVGPG AIGSVAALAA QQTGRHSVTL CARRDPGALR VVDDVSGGVT DLEAPILTSP 
AEVTGPADWV LLAVKAHQTD GAAGYLDALC KPSTTVVALQ NGVEHVERVA PYVNDAQVLP
AIVWISAEPT GPGEVTVRNN ISSLLQVPAG PAGEEFARLL EGASAVEVEL VSDFTTAAWR
KLTTNAIAGV MAVTGRRAAI YQRPDVRELA LALAQETLAV ARAEGAALPE SEAEALVGIF
ERMDPDIGSS ILFDRLAGRE LEWDARNGVV RRLGRRHGIP TPVSDVLVPL LSAASDG