Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Caci_0661 |
Symbol | |
ID | 8331991 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Catenulispora acidiphila DSM 44928 |
Kingdom | Bacteria |
Replicon accession | NC_013131 |
Strand | + |
Start bp | 768903 |
End bp | 769868 |
Gene Length | 966 bp |
Protein Length | 321 aa |
Translation table | 11 |
GC content | 73% |
IMG OID | 644953814 |
Product | ROK family protein |
Protein accession | YP_003111438 |
Protein GI | 256389874 |
COG category | [G] Carbohydrate transport and metabolism [K] Transcription |
COG ID | [COG1940] Transcriptional regulator/sugar kinase |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 31 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGAGCGTGA CTGACACCTC CGGGGACGGC CCGGTGCTGG CGATCGACGT CGGCGGGACG AAGATGGCGG TCGGGGCGGT CGACGCGCGC GGGGAGGTTC TGGCCTCCTT TCGGGTGCCG ACGCCGGTGG GGGCGGGGGC GGACGGCGAG GTGCTGTACG CCGCGCTGCT CGACGCCGTC GACCAACTGC CCTACGAGCG CGGCGCGTTT CGGGCGGTGG GGGTCGGGTG CGGGGGTCCG ATGCGGTGGC CTGCGGGGGA GGTGTCGCCG TTGAACATCC CCGGGTGGCG CGGGTTTCCG TTGCGGTGGC GGCTGGAGGC GGACTTCCGG CGGGATGTGC GGCTGCACAA TGACGCCATC TGCCTGGCCG CCGCCGAGCA CTGGCAGGGT GCCGGGCGCG GGGTGGCGAA CATGCTCGGC ATGGTCGTCT CCACTGGCGT CGGGGGCGGC CTGATCCTCG GCGATCGGCT CATCGACGGC GCCAAGGGCA ACGCCGGGCA CATCGGGCAC GTCATCGTGG ACCAGGAAAC GCCTTGCGCG TGCGGTGGGA CCGGCTGCCT GGAAGCTGTC GCGAGCGGTC CGCGTATGGC CGCGTGGGCG GCGGCGCAGG GGTGGCGCGT CGGCGAGAAG AGCCGCACCG GCAAGGACCT CACCGACGAC GCCCGCGCCG GCGACGGCAT CGCCGAGGCC GCCTTCACCC GCGCCGGTAC CGGGCTCGGC ATCGCGATCG CGGGGGCGGC GGCGATGTGC GACCTGGAGT TGGTGACCAT CGGCGGCGGC ATCGTGCAGG CGGGGGAGCT CCTCTTCGAG CCCTTGCGCG CCGCGCTCCA CCGGCATGCG CGGCTGGACT TCACCAAGAA TCTGAAGGTG GTCCCGGCCG ATCTGGGGCA GGACGCCGGA CTGGTCGGTG CGGCGGCGCT GATCCTGCGC GGTGACGCCT ATTGGTCGGC GGATCGCGTC GACTGA
|
Protein sequence | MSVTDTSGDG PVLAIDVGGT KMAVGAVDAR GEVLASFRVP TPVGAGADGE VLYAALLDAV DQLPYERGAF RAVGVGCGGP MRWPAGEVSP LNIPGWRGFP LRWRLEADFR RDVRLHNDAI CLAAAEHWQG AGRGVANMLG MVVSTGVGGG LILGDRLIDG AKGNAGHIGH VIVDQETPCA CGGTGCLEAV ASGPRMAAWA AAQGWRVGEK SRTGKDLTDD ARAGDGIAEA AFTRAGTGLG IAIAGAAAMC DLELVTIGGG IVQAGELLFE PLRAALHRHA RLDFTKNLKV VPADLGQDAG LVGAAALILR GDAYWSADRV D
|
| |