| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Caci_0444 |
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| Symbol | |
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| ID | 8331771 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Catenulispora acidiphila DSM 44928 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013131 |
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| Strand | + |
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| Start bp | 498312 |
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| End bp | 500072 |
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| Gene Length | 1761 bp |
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| Protein Length | 586 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 644953610 |
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| Product | Ricin B lectin |
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| Protein accession | YP_003111237 |
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| Protein GI | 256389673 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 0.828213 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 32 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAGATAT CCCCGCGGCG CCTCATCACG GCGCTCGCAG CCCTCTGTCT GGGCATCGGC
GCGGCCCTCG GCATGATCGC CGCGCCGGCT CAGGCGGCGG CGTCGGCCAC CAGCGAGCAG
ACCTTCCTGA CCTTCTACGG CTGGTGGGAC AACACGCCGC CCGGCGCCGA CATCGCCTAT
CCGCAGATCC ACCAGACCGC GGGCGGCACC GGGACGTACG CCGATCCGAT CACCTTCGCC
ACCGACTCCA ACGAGCAGCC GCCGGGAACG ATCGTCTACG TCCCGCGCGT CGGCAAGTAC
TTCATCATGG AGGACGGCTG CGACGAGTGC AGCTCGGACT GGACCGGCCA CGGTCCCAAC
GGCGGTCCCA ACCTGCGGCA CCTGGACCTG TGGCTCGGCG GGAAGGGCGG CAACGCCTTC
GACGCCATCG AGTGCGAGGA CGCGCTGACC AACTACAACA GCGACGGCAC GCCGACCATG
GAGCCGGTGA TCGTCAATCC GCCGTCGAAC GAGACGGTGT CCTCCTCGCC GATCTTCAAC
ACCAGCACCG GCGCGTGTTA CGGCGGTGCG AAGCCGACGA TCTCCGTCGG GCAGTACAAG
AACGTCTCGA CCGGCAACTG CATGACCGAC CCGAACAACA GCTCCTCGGC CGGCGCGCTG
CTGGTGACGG CCGCCTGTGA CAGCACCGCG GCCAGCCAGC GCTTCACCTT CGACGGCACG
TTCCTGCAGA TCAACAACCT CTGCGCGGAC TACTCGACCT CGCAGATCTC GATGCAGAAA
TGTACCGCCG GACCCAGCCA ACAGTGGTCG TACAACACCG ACCTGACGTT CACCGACATC
CAGACCGGCA AGAAGTACAT CAACGACTCC TCGGGCAAGG TCAAGTCGGG CAGCAGCTCC
AGCAGCACGA AGACCTGGAC CTACGTCCCG GCCGGCTCCG GCACGACGAA CGACTTCTCC
GTGGCGGCCA GCCCGGCGAG CGCCTCCGTC ACCGCCGGCG GCACCGCGAC CGCGACGGTC
TCCACCGCCG TGACCGCCGG TGCCGCTGAG TCCGTCGCGC TGAGCGCCAG CGGCGGCCCG
GCCGGCTCCA CGGTCAGCCT GAGCCCGACC AACGTCACCT CCGGCGGCAG CTCGACCCTG
AGCGTCGCGA CCACCTCCAC GACCGCCCCC GGGACGTACA CCATCACGGT CACCGGTAAG
GCTGCGACCG GTACCCACAC CGCCACCTAC ACGCTGACGG TGAACCCCGT CTCCGGAGGG
GGCGGCTGCA CCGCGGCCCA GCTGCTGACC AACCCCGGCT TCGAGAGCGG CGCCAGCACC
GGCTGGACCG GCAGCTCCAC CCTGGGCTTC AACCCGATCA CCAACAGCAC CAGCGGCGAG
CCGACGCACG CGGGCTCCTG GGAGTCCTGG TTCAACGGCA ACGGCTCGGC CGACACGGAC
ACCGTCGCGC AGTCGGTGAC CATCCCGTCG GGCTGCACCG CGACCCTGTC CTACTGGCTG
CACATCGACA CGACCGAGAG CACGTCGACG GCCAAGCCGG ACACCTTCAG CGTGCAGCTG
CTCAACTCCT CGGGCACCGT GCTCACCACG CTGGCCACCT ACAGCAATCT GGACAAGGCC
AGCGGCTACA CCCAGCACAG CAGCGACGTG TCGGCCTACG CGGGTCAGAC CGTCAAGCTC
CGCTTCACCG GCACCGAGAC CGACAAGAAC GGCGGCACCA CCAGCTTCGT CCTCGACGAC
ACGGCGTTGA ACGCGAAGTA G
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| Protein sequence | MKISPRRLIT ALAALCLGIG AALGMIAAPA QAAASATSEQ TFLTFYGWWD NTPPGADIAY
PQIHQTAGGT GTYADPITFA TDSNEQPPGT IVYVPRVGKY FIMEDGCDEC SSDWTGHGPN
GGPNLRHLDL WLGGKGGNAF DAIECEDALT NYNSDGTPTM EPVIVNPPSN ETVSSSPIFN
TSTGACYGGA KPTISVGQYK NVSTGNCMTD PNNSSSAGAL LVTAACDSTA ASQRFTFDGT
FLQINNLCAD YSTSQISMQK CTAGPSQQWS YNTDLTFTDI QTGKKYINDS SGKVKSGSSS
SSTKTWTYVP AGSGTTNDFS VAASPASASV TAGGTATATV STAVTAGAAE SVALSASGGP
AGSTVSLSPT NVTSGGSSTL SVATTSTTAP GTYTITVTGK AATGTHTATY TLTVNPVSGG
GGCTAAQLLT NPGFESGAST GWTGSSTLGF NPITNSTSGE PTHAGSWESW FNGNGSADTD
TVAQSVTIPS GCTATLSYWL HIDTTESTST AKPDTFSVQL LNSSGTVLTT LATYSNLDKA
SGYTQHSSDV SAYAGQTVKL RFTGTETDKN GGTTSFVLDD TALNAK
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