Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Caci_0442 |
Symbol | |
ID | 8331769 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Catenulispora acidiphila DSM 44928 |
Kingdom | Bacteria |
Replicon accession | NC_013131 |
Strand | + |
Start bp | 496241 |
End bp | 497434 |
Gene Length | 1194 bp |
Protein Length | 397 aa |
Translation table | 11 |
GC content | 73% |
IMG OID | 644953608 |
Product | hypothetical protein |
Protein accession | YP_003111235 |
Protein GI | 256389671 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 28 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | GTGGGCCAGG ATTCACAGAA CTCTGATTCA CTCGGCCGCC GGCGGGCTCC CGCGCTCGCC CGGTGGCCGC TCGGGCGGGT CGCGTTCGCC ACGTTCTGCG CGACCTTGGC GCTGGCTCTC GGCGTGCTCG CCGGGGTGCT GGGGTGGCTC GGGCTGCTGT CGCGCTCCTC GTTCCGGTCC TCGCCGGGGA CGGCGTTGGA CGTCGTCAAG CTCGTCCTCG GCGCGGTCGC CGGCGTCGGC GCGCTGGTCG GGCTGGTCAT CGCCTACCGG CGGCAGCTGG TCGCCGAGAC CGCCGACGAC CGGGAGCGCA CCCGCCTTTT CAACGAGCGC TTCAACGCCG CCGCCGAGCA GTTGGGCTCG GACCGGGCCG GGGTGCGGCA GGCGGGCATC TACTCGATGG AGGGGCTCGC CGACGACTGG CCCGCCGGCC GGCAGAAGTG CGTCGACGTC CTGTGCGCGC TCGCGCGGCG CGGCCACGTC CTGCAGCCGC CGGCGGACGC GCCGATCGAG GACCGCCTGG CCTGGGACGA CGACCGCCAG TTCCGGCACG CGATCATGCG GGTCGTCGCC GACCATCTGC GGCCGGCCGC GGCGGTGCCG TGGCGGGGCG GGAACTTCGA CTTCACCGGC GCGCTCGTCG ACGGCGGCGA CTTCGAGGGC ATCGAGCTGA CCGGCGGCCG GCTGGTCTTC GCCGGCGCGC GGTTCGTGGC CGGGGCGCCG CTGGTGCTGC GCGGCAGCCG GATCGACGGC GGGCTGCTGG ACGTCCGCGG CGCGGTCTTC GACTCCGGCG CCCTGGACCT GAGCAAGGCC TCGGTCGGAC CGCAGGCCAC GGTGAACTTC AGCGACGTGC TGTTCCAGGA CGGCTACATC GACATCCGGA CGACCACCAT CGAAGGCTGC TGCTATCTGT GCCGCGCGAC CATGAGCGGC GCCGAGATCG AACTCTCGGA GTCCTCGCTG CGCGGGACCA TCGATTTCCG GGACGCGCGG CTGGCCGGCG GTGTGATGCG GTTCGACGGC GCGGTGGTGG CGCCGGAGCG GTTCCGCTTC GCCGGCGCCA GGTTCGAGGG CGCGACACTG GACTTCTCCG GTGCCCAGGT CGACGGCCTG TTGGATTTCG GTACCGCCGC CTCGCCGACC GGCGTGATGC TGCCGCCGAC ACCGACTGTT GCGCCGCACT CAGCCCCCGA GTAG
|
Protein sequence | MGQDSQNSDS LGRRRAPALA RWPLGRVAFA TFCATLALAL GVLAGVLGWL GLLSRSSFRS SPGTALDVVK LVLGAVAGVG ALVGLVIAYR RQLVAETADD RERTRLFNER FNAAAEQLGS DRAGVRQAGI YSMEGLADDW PAGRQKCVDV LCALARRGHV LQPPADAPIE DRLAWDDDRQ FRHAIMRVVA DHLRPAAAVP WRGGNFDFTG ALVDGGDFEG IELTGGRLVF AGARFVAGAP LVLRGSRIDG GLLDVRGAVF DSGALDLSKA SVGPQATVNF SDVLFQDGYI DIRTTTIEGC CYLCRATMSG AEIELSESSL RGTIDFRDAR LAGGVMRFDG AVVAPERFRF AGARFEGATL DFSGAQVDGL LDFGTAASPT GVMLPPTPTV APHSAPE
|
| |