Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Caci_0438 |
Symbol | |
ID | 8331765 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Catenulispora acidiphila DSM 44928 |
Kingdom | Bacteria |
Replicon accession | NC_013131 |
Strand | + |
Start bp | 488883 |
End bp | 491351 |
Gene Length | 2469 bp |
Protein Length | 822 aa |
Translation table | 11 |
GC content | 74% |
IMG OID | 644953604 |
Product | hypothetical protein |
Protein accession | YP_003111231 |
Protein GI | 256389667 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 0.883391 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 23 |
Fosmid unclonability p-value | 0.390424 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGACCCGCA TCGTGCCGGA CGACGCGCGG GCGGCGCTCG CGGACTTCAT CGAGGCGGTG GCGCCGGCGG AGCTGTCGGC TGAGGAGATC GCCGAGGCGC TGTGGCTGGC GCAGTGGATC AACCAGTCCG CGGGCGCGAC AGCCGGCTCC GCCGAGCCAC AGCAGGAATC CGGTCAGGAG GCGCCGCCTC CACACCGCGT TCCGGTGTCG ATTCCCAGAA CCCCCGCCGG ACGCCAGCAG CCTGCCCGAG CGCACCCGCC GGCCACCGTC GCCGACGCCG AATCAGAGCC CGAGCGCCGC ACCTCGCCAC CCCCGCGGCT CATGGGATCG GCGCTGATCC GCGTGCCCTC GCCGACCGGG TCGGAGGCGG TGCGCTTCGC CCGCTCGCTG CGGCGCCTGC GGCCGCTGCC GGTCCGCCGC GCCCCTGGCA CGGCGGACGC CGCCGCGACC GTGGACGAGG CGGAGACGGC GCGCTTCGCG GCGGAGACCG GGCTGCTCTG GCCGGTCTAC ACGCGCCAGC GTCCCCGGCG CGGCGTCGCG AAGGTAGTCG TCGACACCTC GGTGTCCATG CAGGTGTGGG AAGGGCTCGA GGAGGACATC GTCAGAGGCC TGTCGCTGTC GCGCGTCTTC CGCAGGGTCG AGACGTGGTC CCTGTACCAG CGCGGCGAGA CGGCTGTGGT GTGCGAACGC AGAGCCGGAG TCGCCGCCGG GCACGAAGGT CCCCTGGCAC GGCTCGCCGA CGGGTCCGGG GACGGCGCCG TCCTCATCCT GTCCGACGGC GTCGCAAGGC TCTGGTACGA CGGCGCCGTG CTGGACGCCG TCGATCGCCT CGCCGTCCAA GGTCCCGTCG CGCTCGTCCA GCCGCTGCCG AATCGGCTGT GGCGCCGGAC AGGGCTCCGT CCGAGGCTGA CGACGGTCAC CGGAACCGCC CGAGGTCCCG AAGCCCTGCA CCTGACGCGC GTCGCGATCG GGACCGCGGC GCCGGCGGTC CCGATCATCG AGGCGGACGA GTCCTGGTTC GCCACCTGGG CCGCACTGGC ATCCGGGCGC CTGGCGACGG CTCGCTTCGC GGTGCTCGGC TCCCGATCGC CCGCCGGCTA CGCGCAGTCG GTGGCGGCGG GCGGCGTCCA GGAACCCGGC CAGCTGGTCG GCGACGGAAT GGCGGTCCCG GTCGTCCGCC GCTTCCGCGC CGCCGCGAGT CAGGGCGCGC GCGAACTGGC CGCCGCGCTG TCTGTCGTGC CGCTCAGTCT GCCGATCATG CAGATGGTCC TCGCCACCTG CTTCCCCGAC CGGAGCCGCG CGCACCTGGC CGAGGTGATC ACCGGCGGCC TGATGCAGCG CGATCCCAAG GTCCCGGAAG GCGGCGGCCC GCCGGCGTTC CGCTGGCTGC CCGGCGTCGG CGAGGAGCTG CGCCGGGAGG TGGACGACCG CCAGGCCGAA CGCGTGCGCG CCGCGCTGTC GGGCTACCTG GACGCCGAGC TCGGGTTCCG GCCGGACTCG CGCGGCTTCA TCGCCATCAT GGGCACGCCC GCGATGCCGG CCGAGCGGGA GGGACGGTTC GGTAGTCCAT TCGCGCGGAT TCTGCCCGAC ACGGTCCGCC GGGCCCTGAA CCATGCCGGC GTCGCCTATA CCGTGTCCGA CACGGTGGGT ACCGCTTCGG AAGCACAGCG CATCACGCAC GCCCTGGCTC TGGCCGAAGC GGCCCGGAAC ACTGGACGGA GTGCGGAGAT CGACGAGGCC ATCGAGGCGG CGAGGCTGGC GGTGAGCGAG GCCGCAGGCC GGGACTGGCC GCTGACCGAC GCGCTGGCCG AGCTGCTCGA GCACCGCGGC CGTCGCGAGG GGTCGCCGTT CGACGCCGAG GAGGCAGTCA TCGTCCTGCG CGAGTACGTC GACCGGGCGC CGGCGGACGA CCCGCACCGC CAAGAGGGTC TGGAACGCCT CGCCGACGCC CTGCTGGCGC GGTATCAGAG CACCGAGTCG CCCGACGACC TCGACGACGC CATCCGGATG CGCCGCCGGC TCGCCGAGGC CGAGGACGCC GCCCAGGACC AGCTGGTGCT CCTCGCCGAC GCCCTGCTCG AGCACCACCG GCTCACCGGC GCCTCGCTGT CCGCCTACGA GGCGACCGAT CTGATGAGCG GTCTGCGCCG CACCGGCCAG AGCGAGGGCG TGCGCGTCGC CGCCACCGCG ATCCTGGCCC GCGGGCTGGA CATCATGAGC CGCTCGACAC GCGCCGAGGA GGACATCGAG GCCTCCGACG CGGTGTGGCT CGCGCTCATG CCGGAACTCG GCGAGCTGAC CGAGGACCAG GCCGCCGTCA CGCGCACCGC GATCGAGGCG CGGATCCGGT TCCACAAGAG TTCGGGGCGC GCCGGGCGTG CGCGCGCCCT GGAGGCCGCG TATGAAGACG CCCTGGGCCG TCTGGGGCAG CAGTGGGGTC TGCCGGGAGC GCAGGCCTCC GCGATCTGA
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Protein sequence | MTRIVPDDAR AALADFIEAV APAELSAEEI AEALWLAQWI NQSAGATAGS AEPQQESGQE APPPHRVPVS IPRTPAGRQQ PARAHPPATV ADAESEPERR TSPPPRLMGS ALIRVPSPTG SEAVRFARSL RRLRPLPVRR APGTADAAAT VDEAETARFA AETGLLWPVY TRQRPRRGVA KVVVDTSVSM QVWEGLEEDI VRGLSLSRVF RRVETWSLYQ RGETAVVCER RAGVAAGHEG PLARLADGSG DGAVLILSDG VARLWYDGAV LDAVDRLAVQ GPVALVQPLP NRLWRRTGLR PRLTTVTGTA RGPEALHLTR VAIGTAAPAV PIIEADESWF ATWAALASGR LATARFAVLG SRSPAGYAQS VAAGGVQEPG QLVGDGMAVP VVRRFRAAAS QGARELAAAL SVVPLSLPIM QMVLATCFPD RSRAHLAEVI TGGLMQRDPK VPEGGGPPAF RWLPGVGEEL RREVDDRQAE RVRAALSGYL DAELGFRPDS RGFIAIMGTP AMPAEREGRF GSPFARILPD TVRRALNHAG VAYTVSDTVG TASEAQRITH ALALAEAARN TGRSAEIDEA IEAARLAVSE AAGRDWPLTD ALAELLEHRG RREGSPFDAE EAVIVLREYV DRAPADDPHR QEGLERLADA LLARYQSTES PDDLDDAIRM RRRLAEAEDA AQDQLVLLAD ALLEHHRLTG ASLSAYEATD LMSGLRRTGQ SEGVRVAATA ILARGLDIMS RSTRAEEDIE ASDAVWLALM PELGELTEDQ AAVTRTAIEA RIRFHKSSGR AGRARALEAA YEDALGRLGQ QWGLPGAQAS AI
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