Gene Caci_0378 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCaci_0378 
Symbol 
ID8331705 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCatenulispora acidiphila DSM 44928 
KingdomBacteria 
Replicon accessionNC_013131 
Strand
Start bp422022 
End bp422486 
Gene Length465 bp 
Protein Length154 aa 
Translation table11 
GC content72% 
IMG OID644953545 
Producttranscriptional regulator, MarR family 
Protein accessionYP_003111172 
Protein GI256389608 
COG category[K] Transcription 
COG ID[COG1846] Transcriptional regulators 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.190004 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones32 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGAACGCCA CCCCTGCGGA CCCGCCGCCT CCTGCCGTCG AGGACGTGGC CACGCACCTG 
CGCAGCGCGG TCGGCACTCT GGTCCGCAGC ACCCGTGCGG TGGACCGGAT CGCTCCCATC
CCGGCGGCGG TGCTCGATCT GCTCGCCGCG CGCGGACCGA TGACCACAGC CGATCTGGCG
TCAAGCCGCG GCGTGCGGCA CCAGACGATG GCCGCGACCG TGAAGGACCT GGCCGACGCC
GGATTCCTCA GCGCCGGACC CGATCCGGAC GACGCGCGCA AGAAGATCCT CGCGCTGACC
GAGGCGGGGA GGCATGCGCT CGACGCCGAC CGCCGACAGC GCACCGTGCT GCTCGCCGCA
GCGCTGGACC AGGCGCTGGA CGCGGACGAA CTGCGCGTCC TGGCGCGGGC GCTGGATCTG
CTCGACCGGG TTTCCGTCGC CGTTAACCAG ATGACAGCGA CGTGA
 
Protein sequence
MNATPADPPP PAVEDVATHL RSAVGTLVRS TRAVDRIAPI PAAVLDLLAA RGPMTTADLA 
SSRGVRHQTM AATVKDLADA GFLSAGPDPD DARKKILALT EAGRHALDAD RRQRTVLLAA
ALDQALDADE LRVLARALDL LDRVSVAVNQ MTAT