Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Caci_0308 |
Symbol | |
ID | 8331635 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Catenulispora acidiphila DSM 44928 |
Kingdom | Bacteria |
Replicon accession | NC_013131 |
Strand | - |
Start bp | 347404 |
End bp | 349626 |
Gene Length | 2223 bp |
Protein Length | 740 aa |
Translation table | 11 |
GC content | 70% |
IMG OID | 644953475 |
Product | MMPL domain protein |
Protein accession | YP_003111102 |
Protein GI | 256389538 |
COG category | [R] General function prediction only |
COG ID | [COG2409] Predicted drug exporters of the RND superfamily |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 0.968834 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 40 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTTCGGAC GGCTCGGACG CTTCGTCGTC CACAATCCCT GGAAGATCAT TGTCGGCTGG ATCATCGCGG CCGTGGCGCT CGTCGCCTTC GGCCCGCAGC TGTCCAGCGT CACCAACGAC AACCAGTCCT CCTTCCTGCC CTCCAAGTAC GAGTCCGTCC AGGCCAAGAA CGCCCTGGAC GCGGAGTTCC CCTCCACCGT CGGGCAGGTC GCGACCATCG TGATCCGGCC GGTCGGCGAC GGCGCGCTCT CCGCCGCGGA GCAGCAGAAG GTCTCTGACC TGGCCACCAC CTTGACCGGC GACCACATCA CCGGGGTCGC CGGGGTGCAG GCCGGCCAGG TCTCGCCGAA GCAGACCGCG CAGCTGATGT TCGCCAAGCT GACCGCCGAC CAGGGCGACC AGAAGGCGAG CAGCGACGCC GTCAAGGCAC TGCGCGCGGA CCTGGCGGCC AAGCTGAACG GCTCCGGCAT GAAGGCCGAG GTGACCGGCG ACGCGGCCAT GGGCCTGGAC ACCTCGGACT CCTCGAACAA GGCCACCGGC ATCGTCATGA TGGCCACGCT GCTGCTGATC ATCGTCCTGA TGGGCTTCAT CTTCCGGGGC GTCATCGCGG TCCTGCTGCC GATCCTGTCG GTGTTCCTGG TGATGATGGT CTCCCAGCCG GTCATCGCGC TGATGGCCAA GGGGTTCGGA CTGCACGTGC AGTCCTTCCT GGAGATCATG CTGGTCGTGG TGCTGTTCGG CATCGGGACC GACTACATCG TCTTCCTGCT GTTCCGGCTG CGGGAACGGC TGCGGGCCGG GGACACGATC CAGCAGGCGG TGGCGACCAC CGTCGAGCGC GTCGGCGAGG CCATAGCCTC GGCCGCGGCC GCGGTCATCA TCGCCTTCTG CGCCCTGGGA CTGGCCACCT TCAAGGCCTT CACCTCGCTG GGCCCGGCGC TGGCCATCGC GGTCGCGGTG ATGCTGCTGG CCGGTCTGAC CCTGGTCCCG GCGCTGATGG TGACGCTGGG CACGAAGATC TTCTGGCCCG GCAAGAAGTG GCGCCGCGTC CCGACCGCGG GCCCGGCCCG CAAGGTGGGC AACCTGGTCG GCAAGCGCCC GGCCGCGGTG GCCGCGGTCT CCTTCGTCAT CATGGCGGGG CTGGCGGTCG GCGCGGTCGG CTTCAAGGCG GACTACGACC AGCAGTCGCA GATGCCGGGA GGCGTCGAGT CCACGATCGC TATCAAGGAC ATGCAGAAGG CCGGCTTCGC CCAGGGCGCG ACCGCCGCGA CGGACGTGAT CGTCACCTCT ACCGACGGCA AGCCGCTGGA CCAGGCCAAG CTCCAGACCT ACGCCGACGG GCTCGGCGCG GCCTCGCCGG AGCTCAGCGG CCTGATGCCG TTCCCGGTCA AGCCGGGCTC CCCGGCCGGC ACCAAGGGCG CCACGGTCGA GTACAACCAG GCCGGAACCG CGGCGCACAT CCAGGTGCTG ACCAAGGATT CGCCGTTCGC CGCGGCCGCG ATGAGCGCGG TCGACGGCCC GCTGAAGAGC GCCGCGCACA GCACCGTCCC GGCCGGAGCC AAGGCGCTGG TCGGCGGCGG GACCGCGGCG CTGTCCGACA TCCAGGCGGC GAACAACTCC GACCTGGCGC TGATCCTGCC GGTCGCCGGG CTGCTGATCT TCCTGGTGCT GGCGCTGCAG CTGCGGGCCC TGGTCGCGCC GCTGTACCTG ATGGTCGCCG TGGGTCTGGG CTACACCGGA ACCCTGGGCG CCTCGGTGCT GATGTTCCAG ACCGTCCAGA ACAAGCCCGG CATGATGTTC ATGCTGCCGG TCATGGTCTA CCTGTTCGTG GTGGCGATCG GCACCGACTA CAACATCCTG ATGATCTCCC GGCTCCGCGA GGAGGCCCGC GAGGGCCACG ACCCGCGGCG CGCGGCGGCG CTGGCCGTCG AGCACGCCGG GCCGTCGGTC GCCTCGGCCG GGCTGATCCT GGCCGGCACG TTCGCCTCGC TGATGCTGGG CGGGCTGGCG ATGATGCAGC AGATCGGGTT CGCGGTGTCG TTCGGCATCA GCATCGCGGC GTTCGTGATG TCGATGTTCC TGGTGCCGGC CGTCACGGCG CTGATGGGAG CCAAGGCGTG GTGGCCCGGG CACAAGGGTG TGGCGTCCGC GACCGCCGGG GTTGGGCGGC CGGTCGTCAG CGACCTGGAC GACGAGGTCG TCGGCGCAGG TGCGCACCGG TGA
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Protein sequence | MFGRLGRFVV HNPWKIIVGW IIAAVALVAF GPQLSSVTND NQSSFLPSKY ESVQAKNALD AEFPSTVGQV ATIVIRPVGD GALSAAEQQK VSDLATTLTG DHITGVAGVQ AGQVSPKQTA QLMFAKLTAD QGDQKASSDA VKALRADLAA KLNGSGMKAE VTGDAAMGLD TSDSSNKATG IVMMATLLLI IVLMGFIFRG VIAVLLPILS VFLVMMVSQP VIALMAKGFG LHVQSFLEIM LVVVLFGIGT DYIVFLLFRL RERLRAGDTI QQAVATTVER VGEAIASAAA AVIIAFCALG LATFKAFTSL GPALAIAVAV MLLAGLTLVP ALMVTLGTKI FWPGKKWRRV PTAGPARKVG NLVGKRPAAV AAVSFVIMAG LAVGAVGFKA DYDQQSQMPG GVESTIAIKD MQKAGFAQGA TAATDVIVTS TDGKPLDQAK LQTYADGLGA ASPELSGLMP FPVKPGSPAG TKGATVEYNQ AGTAAHIQVL TKDSPFAAAA MSAVDGPLKS AAHSTVPAGA KALVGGGTAA LSDIQAANNS DLALILPVAG LLIFLVLALQ LRALVAPLYL MVAVGLGYTG TLGASVLMFQ TVQNKPGMMF MLPVMVYLFV VAIGTDYNIL MISRLREEAR EGHDPRRAAA LAVEHAGPSV ASAGLILAGT FASLMLGGLA MMQQIGFAVS FGISIAAFVM SMFLVPAVTA LMGAKAWWPG HKGVASATAG VGRPVVSDLD DEVVGAGAHR
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