Gene Caci_0306 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCaci_0306 
Symbol 
ID8331633 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCatenulispora acidiphila DSM 44928 
KingdomBacteria 
Replicon accessionNC_013131 
Strand
Start bp345021 
End bp345965 
Gene Length945 bp 
Protein Length314 aa 
Translation table11 
GC content76% 
IMG OID644953473 
Productpeptidase M48 Ste24p 
Protein accessionYP_003111100 
Protein GI256389536 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG0501] Zn-dependent protease with chaperone function 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones42 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGTTCGCTG ACGCCTGGCC GCTGGCCGTC CTCGCGATCC TGCTCGCCTG GCCGGTCCCG 
GTGTTCCTGG CCCGCGCCGC TTGGCCGCGG CGGCATGCGC GCGCCGCCAT CGCGTTGTGG
CAGGCGGTCG GCGTCGCCGG TGGTCTGGCG CTGATCGGGG CGCCGTTGGC GGTGGGCGTC
GCCCCGCTCG ACGGTCATCT GCGCACCGGG CTGGTCGAGC TGTGGCGCGA CGCCTTCCAT
CTGCGCGTGC CCGCGGCGCT CGGTCTGGCC CAGGAGATCG CGCTGGCGCT CGCCGCCGTG
CTGACGGTCC GGCTGGTCGG TGTGACCTTG CTCTCGGCGT GGCGGATAGA GCGCGATCTG
CGGCGCCAGC GCGACGCCGT CGACCTCGCC GCCGAGCACG CCGACCGGGA TCTGCGCGTC
CTGGAACACG CCGCGCCCGC CGCCTACTGC CTGCCCGGCA CGCGGCCGCG CATCGTCATC
ACCGAGGGCA CCATCGCCGC ACTCGCCCCC GACGAGCTCG AAGCGGTCCT CGCCCACGAG
CGCGCCCACG CCCGGTGGCG CCACGAGCTC GTGGTCCAGC CCTTCGTCGC CTGGGAGTCG
GCGCTGCCGC TGCCTCCGGC CCGGCGCGCG ACCGCCTCGG TCACCGCCCT CGTCGAGATG
CTCGCCGACG ACCACGCCGC CCGCTCCGTC GGACGTCCGG CACTGGCCCG CGCGCTCGTC
GCTATCGGCG GCACCGCCGG TCCGGTACCG AATCAGCGCA CGGACGGCGC CCCGGGTTCC
GGCTCCGATC CCAACCCCGT CCGCGCCACG CCGACCCTCG ACCGCGTCCA GCGCCTGGTC
CGCCGGCCCA AGGCGACCAG CCTCGCCGAA CGCCTCATCG GCCCGGCGGC CTGGCTCGCC
GCGGTGCTGC TCGTCGCCGG GCCGACCTGG TACGTCCTGC GCTGA
 
Protein sequence
MFADAWPLAV LAILLAWPVP VFLARAAWPR RHARAAIALW QAVGVAGGLA LIGAPLAVGV 
APLDGHLRTG LVELWRDAFH LRVPAALGLA QEIALALAAV LTVRLVGVTL LSAWRIERDL
RRQRDAVDLA AEHADRDLRV LEHAAPAAYC LPGTRPRIVI TEGTIAALAP DELEAVLAHE
RAHARWRHEL VVQPFVAWES ALPLPPARRA TASVTALVEM LADDHAARSV GRPALARALV
AIGGTAGPVP NQRTDGAPGS GSDPNPVRAT PTLDRVQRLV RRPKATSLAE RLIGPAAWLA
AVLLVAGPTW YVLR