Gene Caci_0132 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCaci_0132 
Symbol 
ID8331457 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCatenulispora acidiphila DSM 44928 
KingdomBacteria 
Replicon accessionNC_013131 
Strand
Start bp136808 
End bp138706 
Gene Length1899 bp 
Protein Length632 aa 
Translation table11 
GC content69% 
IMG OID644953299 
Producthypothetical protein 
Protein accessionYP_003110928 
Protein GI256389364 
COG category[S] Function unknown 
COG ID[COG4289] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones32 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCCGGCG CGTTGGATGT CCCCGAGGAC CGGCGGGCTT CGCCGTACAC CGGCTGGACG 
CGCGAGCACT GGCTCGCGCA GGCCGATCAC CTGCTCGATT CGGTGAAACC GTTCGCCTCC
CCCAGTTCCG CGCGCTTCGA GCTGCCGGGG CGTCCCAGCG TCTCGGGTTT CGACTCGGAC
GCCTTGGAGG GCTTCGCGCG CACCTTCCTG CTCGCGGCGT GGCGGATCGT CGCCGACCAG
GGTCGGGGAC CGGTCGCCGA GGATCTGATC GCGCGGTACT CGTCGGGGCT GGCCGCCGGT
GCGGACGCCG CGCATCCCGA GGCCTGGCCA CGGATTCCGC AGGGACGGCC GGGGCAGCCG
ATGGTGGAGG CGGCGTCGAT CGCGCTGGGT CTGCACTACA CGCGCGAATG GCTGTGGGAC
AAGCTGGACA CGCGCGCTCA AGGGCTTGTC GCCGACTGGC TCGGCGAGTT CGTCGGCAAT
CCGACGTGGC CGAACAACTG GATGCTGTTC CAGACGGTCA CCGAGGAGTT CCTGTCGTCG
ATCGGCGCCG AATATGAGGA GTCTGAGATC CTGCGGGGTC TGGACGCCAC CGAGGAGTGG
TACGTCGGCG ACGGCTGGTA CACCGACGGC GCCGGGCGCA ACTTTGACTA CTACATCGGC
TGGGCGATGC ACCTGTATCC GCTGGTGTGG ACGCAGATGG CCGAGGGTGG GGCGCGCAAT
GACCGCGCAC TCGCGGCGCG CGAGGTGTAC CGGGACCGGC TGCGGCAGTT CCTGGAGCGC
TACTTCGACT TCTTCGGCGC CGACGGCGCG CCGATCCACC AGGGTCGGTC GCTGACCTAC
CGATTCGCGG CGGCCGCGCC GATCTGGGTC GGGGAGATGT TCGACTGTTC CCCTTACGGC
GCAGGGCTTT CGCGGCGTGC GGCCAGCGGC GTGATGAAGC ACTTCGCCGA GCACGGCGCC
CCCGATGAGC GCGGGTTGCT GACGCTGGGA TGGCATGAGC CGTTCCTGCC GATGGTGCAG
AACTATTCGG GCCCTGCTTC GCCGTACTGG GCGTCGAAGG GGTTCATCGG ACTGATGCTT
CCGGCTGACC ACAGGGTGTG GACGGCGCCG GAGTCGCCGC TGCCGGTGGA GGTCGCGGAC
TTCGAGACCG CGATCGGCCC GGTCGGCTGG TCGCTGAGCG GGACGAAGCG CGACGGCGTG
GTCCGGCTGC TGAACCACGG CAGCGACAAG GCACGCCACC ACACGACGCC GCTCGCCGAG
TACACCGACG CCTTCTACTC GCCGCTGGCG TTCTCGACGG TGACCGCGCC GGACACCGAA
GCCGAGGCGT GGGCCAAGCG CGTCGGCAAC CACGTCGCGC TGATCGCGCC GGACGGCCGG
GTTACCTCGC GCGCCGTGAT CGAGCCGATC GGGGCGGCAG CCGAGTGGGG CGCGTCGCGG
CACGTCCCGG GCTTCGAGGA GGAGCCGGGC GGTACGGTCC GCGGGGTCGA GGGCGCGGAG
ATCGAGACTC AGACCTTTGT CAAAGAAGGC GCCGAGATCC GGGTCCACCG CGTGACGGCG
CCTGCCGGCT GGACCGTGCG CGAGGGCGGT TATCCCGTCG CCGGTCCTGA GCAGGTGCTG
CGTGGTGAGA ACGAGAAGCT GCCCGGTGCG TTCGCGATCA ACGACCTCGG GGTGATGTCT
CGGATCGAGA GCCTTGGCGG TTGGACGTCG GCCGGTGTCG AGAGCGAGTT GGGCGCCAAC
GCGCTGGGAG CGTTCTCGGG GACGCCGTAT CTGATGGCAG AGCATCCTGG CGGGACGGTG
TTCTACCGGT CGAAGGTCAT GGTGTATCGG CTCCCTGATG AAGGCGTCGA TGAAGGTGCC
GATGAGAGTG TCGACGAGGG AGGCGAAGTC GCCGAATGA
 
Protein sequence
MAGALDVPED RRASPYTGWT REHWLAQADH LLDSVKPFAS PSSARFELPG RPSVSGFDSD 
ALEGFARTFL LAAWRIVADQ GRGPVAEDLI ARYSSGLAAG ADAAHPEAWP RIPQGRPGQP
MVEAASIALG LHYTREWLWD KLDTRAQGLV ADWLGEFVGN PTWPNNWMLF QTVTEEFLSS
IGAEYEESEI LRGLDATEEW YVGDGWYTDG AGRNFDYYIG WAMHLYPLVW TQMAEGGARN
DRALAAREVY RDRLRQFLER YFDFFGADGA PIHQGRSLTY RFAAAAPIWV GEMFDCSPYG
AGLSRRAASG VMKHFAEHGA PDERGLLTLG WHEPFLPMVQ NYSGPASPYW ASKGFIGLML
PADHRVWTAP ESPLPVEVAD FETAIGPVGW SLSGTKRDGV VRLLNHGSDK ARHHTTPLAE
YTDAFYSPLA FSTVTAPDTE AEAWAKRVGN HVALIAPDGR VTSRAVIEPI GAAAEWGASR
HVPGFEEEPG GTVRGVEGAE IETQTFVKEG AEIRVHRVTA PAGWTVREGG YPVAGPEQVL
RGENEKLPGA FAINDLGVMS RIESLGGWTS AGVESELGAN ALGAFSGTPY LMAEHPGGTV
FYRSKVMVYR LPDEGVDEGA DESVDEGGEV AE