Gene Caci_0131 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCaci_0131 
Symbol 
ID8331456 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCatenulispora acidiphila DSM 44928 
KingdomBacteria 
Replicon accessionNC_013131 
Strand
Start bp135108 
End bp136808 
Gene Length1701 bp 
Protein Length566 aa 
Translation table11 
GC content67% 
IMG OID644953298 
Producthypothetical protein 
Protein accessionYP_003110927 
Protein GI256389363 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones34 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCTACC TGGCCGCCCT GGAAGACGAG GTCCGCGACG TCGTGGCGAG GGCGGCCGGA 
TCCGCCGCGC CCGAGCTGAC CTACACGCTG TATCGGCAGT TCGGCGACAC CGGACACCGT
TTCAGCTACG AGCATCCCTA TTTCGAGCGG CGCGGGCGGC TGGTCGCAGC CGGTGCGGCC
GCGATCTTCG ACCTGCGGAC AGACAGCGCC GTGAGCCCGG AGGTGCTCGC CGTTCTCGCC
GACGAGCTGT GGCGAATCTG CGACGAGCAC ACCTGGGCCC TGCCCGCGCA CGAGCAGTAC
GCGCGGGACG GGGACATGCG GCGCAACGTC GACCTGTTCG CGGCCGAGAC CGCGCACACC
GTCGCCGACT TGATCGAGCG CTTCGGCAAG CAGCTGCCCG AAGACGTGAT CATGCGCTGC
CGCGAGGAGT TGCTGGACCG GGTCTTCATC CCGTTCGCCG ATGACCAGCG GCCGATGGCG
TTCGAGAAGA TGACCAACAA CTGGCTCGCC GTGGTCGCCG GCGGCGTCGG AATGGCAGCG
CTGGCCTTCT TCCCCGACGA TGCCAAGCGA CTGGCGATGA TCCTCAAGCG CGCGCAGAAG
TCTTTGCGCC GCTTCATTGA GTACTACCCC GCCGACGGCG GTTGCTCGGA GGGCATGGAC
TACTGGGTCT ACGGCTTCGG GTACTTCGCC TACTTCGCCG AGGCCTGGAG GGAGCGAGGC
GGCCCGGATC TGTTGCTGGA CACCAAAATC CGCGAGATCG CCGCCTTCCC AGCCCGAGTC
GGATTCGGCG ACGGACGCTT CCCCAGCTTC TCCGACGGTT CGGAGACCGC GACGATCCCG
ACCGGATTGA TGGCGCGGCT CGTCGAGCGG CTCGGCGTGC CGGTGCCGCG CATCGAGACG
GTTCCGACCT TTGCGTCAGA CTTCTGCCAT CGCTGGCCGC ACCTCTCCAA GAACATCGAG
TGGACGACGG AGCGCGTGCT GAATCGCGCG GCCAGCCCGG GTGTTTCGTA CCTGCCGGAT
CTGGCGTGGG TCGTCGATTG CGGCGGCGAG GCGGAGTTCG CGGCCAAGGG CGGGCACAAC
GACGAGTTCC ACAACCATCT GGACGTCGGC CAGTTCATCT TGCGTGCGCA CAGCGAGACG
TTCCTCGCCG ATCTCGGTGC GGGCGAATAC ACCGCCGACT ACTTCGGGAC CAAGCGGTAT
CAGCACGTTC ATACCGCAGC CGAGGGGCAC TCGCTCCCGG TGATCGACGG CCGCGGGCAG
TTGCCGGGCG CCCAGCACGC CGCGAAGGTC GAGCGGTTCG CCGAGACCGG GCAGGGCGCG
ATCCTCACAC TGGACATGAC CTCGGCCTAC GAGGTCCCCG GGCTGCTCGC TCTCGGACGC
CGCTTCACCT GGCAGCGGCA CGGCAGCCTG GTCGTCGTGG ACCGGGTCGA GACCGACCGT
CCGATGCCCT TCGAAGAGCT CTACATCAGC CGGATCCGAC CCGTGCTCGA GGCCGATCGC
GTGGTGTGGG AAGGCGAAGC GGCGCGCTGT GTACTTACCT GGCAGGAAAC CCTGGCGATG
ACCCCGGAAC TGGAGACCAT CGAGACGACC GGTCACCGCG GGGAGCTGGA AAGCGTTTTC
CGAGTTCGGC TACGATGCAT GATCGAGGCT GGTGCCAGCC GGCTGGAGTC CGTGTTCACC
GTCGAGCGCA AGGAGCGTTG A
 
Protein sequence
MSYLAALEDE VRDVVARAAG SAAPELTYTL YRQFGDTGHR FSYEHPYFER RGRLVAAGAA 
AIFDLRTDSA VSPEVLAVLA DELWRICDEH TWALPAHEQY ARDGDMRRNV DLFAAETAHT
VADLIERFGK QLPEDVIMRC REELLDRVFI PFADDQRPMA FEKMTNNWLA VVAGGVGMAA
LAFFPDDAKR LAMILKRAQK SLRRFIEYYP ADGGCSEGMD YWVYGFGYFA YFAEAWRERG
GPDLLLDTKI REIAAFPARV GFGDGRFPSF SDGSETATIP TGLMARLVER LGVPVPRIET
VPTFASDFCH RWPHLSKNIE WTTERVLNRA ASPGVSYLPD LAWVVDCGGE AEFAAKGGHN
DEFHNHLDVG QFILRAHSET FLADLGAGEY TADYFGTKRY QHVHTAAEGH SLPVIDGRGQ
LPGAQHAAKV ERFAETGQGA ILTLDMTSAY EVPGLLALGR RFTWQRHGSL VVVDRVETDR
PMPFEELYIS RIRPVLEADR VVWEGEAARC VLTWQETLAM TPELETIETT GHRGELESVF
RVRLRCMIEA GASRLESVFT VERKER