Gene Caci_0009 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCaci_0009 
Symbol 
ID8331333 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCatenulispora acidiphila DSM 44928 
KingdomBacteria 
Replicon accessionNC_013131 
Strand- 
Start bp13602 
End bp14144 
Gene Length543 bp 
Protein Length180 aa 
Translation table11 
GC content63% 
IMG OID644953175 
Producthypothetical protein 
Protein accessionYP_003110805 
Protein GI256389241 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.336851 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones27 
Fosmid unclonability p-value0.758616 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCGCAG TCCAAATCGC AGGCTGTTCC GCCGCCGGCA AATCCGCCAT AGCAACCGCA 
CTAGCCCACC AAGGCCTAAC CACCATCGAC TCCGACGCCG ACCCCCATCT CGCAAGGTTC 
GTCGATCCCC AAGGCACCAT CGTGGCGCAA CCACCACCAG CGCCAGACCT ACCCTGGCTC 
GCCGAACACA GCTGGGCCTG GGACCCGAAC CGCCTAGACG AACTGATCCA AACAGCAGCA 
CCAGCAACGC TCTACGTCTG CGGCGGCGCG GACAATCAGC ACGAGATGGC CAACCGCTTC 
ACCCAAGTCT TCCTCCTGGA GATCGACGAA CCCACAATGC TGGCACGCCT AGACGCACGC 
CGCGATTATC ACGAGTGGGG CCACGTCGGA GACACCCGCG AGTATCTACG CCGAAAGCTC 
CCCATACTGC AGGACACCTT GCGCGCATCA GGCGCAATCG TCATCGACGC CAGACAGCCC 
CTCGACCAGG TGGTGGCCGC GGTACTGCGG TACACGCCGC CGATGGCGCC ATTCTCTTTC 
TGA
 
Protein sequence
MSAVQIAGCS AAGKSAIATA LAHQGLTTID SDADPHLARF VDPQGTIVAQ PPPAPDLPWL 
AEHSWAWDPN RLDELIQTAA PATLYVCGGA DNQHEMANRF TQVFLLEIDE PTMLARLDAR 
RDYHEWGHVG DTREYLRRKL PILQDTLRAS GAIVIDARQP LDQVVAAVLR YTPPMAPFSF