Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | CPS_5048 |
Symbol | mioC |
ID | 3522740 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Colwellia psychrerythraea 34H |
Kingdom | Bacteria |
Replicon accession | NC_003910 |
Strand | - |
Start bp | 5367872 |
End bp | 5368369 |
Gene Length | 498 bp |
Protein Length | 165 aa |
Translation table | 11 |
GC content | 36% |
IMG OID | 637287487 |
Product | mioC protein |
Protein accession | YP_271686 |
Protein GI | 71282267 |
COG category | [C] Energy production and conversion |
COG ID | [COG0716] Flavodoxins |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 2 |
Plasmid unclonability p-value | 0.00482847 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAGCTCAG TTCAAATCAT TGTTGGTAGC ATGCTTGGTG GCACAGAATA TGTTGCAGAA GCCTGTGAAG AAACCCTAAA TAAACTTGAT CATACTGTTG ATATACACCT TAAACCGGAT CTTAAAACCG TCATCAACAA CACTTTTCAC GCGAATAATG AACAAAATAA CGACAGTGTT CTAGCCCAAA ATCCTATTTG GATCATTTGT ACCTCCACAC ATGGTGCTGG TGACTACCCT GACAACATCA AACAATTTGT TAGTGATCTA AGTAATTGTG ATCAAGATCT ATCCACGGTT ACTTTTTTAA CAATTGGGAT CGGAGATTCT AGCTATGATA CTTTTTGCAA AGCAGCAATA GATTTATCAA ACCTATTAAT ATCAATTGGT TGTAAAGAAA TAGTACAAAT TAAAACCTTA GATATGTCAG AAGATATCGA TCCAGAAGAG CTCGCTCAGC AGTGGATCAG TACAAATAAA GATCTGCTTT CGATCTAA
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Protein sequence | MSSVQIIVGS MLGGTEYVAE ACEETLNKLD HTVDIHLKPD LKTVINNTFH ANNEQNNDSV LAQNPIWIIC TSTHGAGDYP DNIKQFVSDL SNCDQDLSTV TFLTIGIGDS SYDTFCKAAI DLSNLLISIG CKEIVQIKTL DMSEDIDPEE LAQQWISTNK DLLSI
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