Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | CPS_4956 |
Symbol | |
ID | 3523256 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Colwellia psychrerythraea 34H |
Kingdom | Bacteria |
Replicon accession | NC_003910 |
Strand | + |
Start bp | 5259819 |
End bp | 5261180 |
Gene Length | 1362 bp |
Protein Length | 453 aa |
Translation table | 11 |
GC content | 42% |
IMG OID | 637287395 |
Product | cytosol aminopeptidase family protein |
Protein accession | YP_271595 |
Protein GI | 71277849 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0260] Leucyl aminopeptidase |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 9 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGAATAACT TATTAAACGC ACAAAACGGC GGCACACCAT TAATCATCAT TGAAAAATCA GCCTACCAAG CTTGGCTTGA AAACCAAACC GAACAAAGTC AAACGTGGTT ATCAAATACG CAATTTAGCG GTAAAGGCTT AGCCCTTATC CCTAATAACC AAGGCGAACT CAGTCAGGTG TTATTTGTGG TTACTGATGC CAGCGACTTC TTTGCTTGTG GCGACTTAAT TAAGCAGTTA CCACAAGGGC AATATTTATT ACAAGCTGAG CCAGAACATA TTGAACCTAT TAGCTTCGGT TGGTTAGTGG GTGCTTACCA ATTTGATAGA TACATCAGTA ATAAATCAAC TAAGCAGTTA GCAAGTTTAG CGATTAACAA TGTTGATATT GTAGAGAACG CAATAAAGTT TGCTCAAGCG ACTACATTAA CTCGTGACTT AGTGAATACA CCCGCTGCCG ATATGATGCC GGTAGACATT GCTCAAGCTG CGTTGGAACT CGCAGAAAAA TTTAACGGTA ACGTTAAACA AATTATTGGT GATGAACTGT TAGTACAGAA TTATCCGACC ATTCATGCTG TCGGCCGTGC CAGTATTCAT ACACCCCGCT TAGTCGATTT AACATGGGGT GATAGTAAAA ACCCACAAGT CACTTTAGTT GGTAAAGGTG TTTGTTTTGA TAGCGGTGGT TTAGATATGA AACCTGCTGC GGGCATGCGA AACATGAAAA AGGACATGGG CGGTGCTGCC CATGTGTTAG GTCTAGCACA ATTAATTATG GCGCATAACT TACCGATTAA TTTACGTGTA TTAATTCCAG CAGTAGAAAA TGCAGTATCA AGCAACGCAC TTCGTCCAGG CGATGTAGTT ACTACTCGTA AAGGCCTTAC TGTAGAGATT CATAATACCG ATGCTGAAGG CCGTTTAGTG TTATGTGATG CACTAGCTGA GGCTGAAAAT GATGAACCTG AATTAATTAT AGATTTCGCT ACCCTTACAG GTGCGATGCG CGTGGCTTTA GGTACTGAAT TACCTGGTTT TTTCTCTACC AATGATGAAG TTGCCGCAGG CATTACCTTA GCGGGTAGCA AAATTAGTGA TCCCGTATGG CGTATGCCAC TTTATAGCCC ATATGATAAT ATGTTCGACA GCACCATTGC TGATATGACT AACTGCCCAA CACAGCCTTT TGGTGGTGCT ATTACTGCAG CATTATATTT ACAACGTTTT GTCGAAAAGA CAGATTGGGT ACATTTTGAT GTCATGGCCT TTAATGTTCG CCATTTGTCA GGGCGTCCGT TAGGTGGTGA AGCATTCGGT ATTCGCGCCG TGTTCGATTA CTTAGCAGCT AGATTTAACT AA
|
Protein sequence | MNNLLNAQNG GTPLIIIEKS AYQAWLENQT EQSQTWLSNT QFSGKGLALI PNNQGELSQV LFVVTDASDF FACGDLIKQL PQGQYLLQAE PEHIEPISFG WLVGAYQFDR YISNKSTKQL ASLAINNVDI VENAIKFAQA TTLTRDLVNT PAADMMPVDI AQAALELAEK FNGNVKQIIG DELLVQNYPT IHAVGRASIH TPRLVDLTWG DSKNPQVTLV GKGVCFDSGG LDMKPAAGMR NMKKDMGGAA HVLGLAQLIM AHNLPINLRV LIPAVENAVS SNALRPGDVV TTRKGLTVEI HNTDAEGRLV LCDALAEAEN DEPELIIDFA TLTGAMRVAL GTELPGFFST NDEVAAGITL AGSKISDPVW RMPLYSPYDN MFDSTIADMT NCPTQPFGGA ITAALYLQRF VEKTDWVHFD VMAFNVRHLS GRPLGGEAFG IRAVFDYLAA RFN
|
| |