Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | CPS_4886 |
Symbol | |
ID | 3520735 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Colwellia psychrerythraea 34H |
Kingdom | Bacteria |
Replicon accession | NC_003910 |
Strand | - |
Start bp | 5181452 |
End bp | 5182489 |
Gene Length | 1038 bp |
Protein Length | 345 aa |
Translation table | 11 |
GC content | 45% |
IMG OID | 637287325 |
Product | putative ornithine cyclodeaminase |
Protein accession | YP_271525 |
Protein GI | 71280271 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG2423] Predicted ornithine cyclodeaminase, mu-crystallin homolog |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAGTGATT CAAAAGAAAA CCATGCACCA GAAAACCATT CACATAAAAA CTCTTTACCC GTTAACAAGG GCGTATCAGT TGTTTCAGAA GCGGTTTGCC AAGAAGTTAT GGGTAGAGCA GATGCCTTTA CCGCAGTAGA AAACGTATTT TCTGCAATGG CGAAAAATAC CGCCTACAAC TTTCCGGTAA TACGTGAAGC CATTGGTCAT GCGGATGCCC TCTATGGTTT TAAATCGGGC TTCGACCGTG ACGGTATGGT GCTTGGCTTA AAATCAGGGG GATACTGGCC GGGTAATGTG CAAAAAGACC TGACTAACCA CCAATCCACA GTGATTTTGT TTGACCCTGA TACCGGCCAG TTAAAATCCC TTGTTGGCGG TAACTACTTA ACTGCCGTGC GAACTGCTGC CTCTTCTGCC GTTTCTATTG CGCATTTAGC TCGTAAAGAT TCAAAAGTGC TAGGTATGGT AGGTGCAGGT CACCAATCAA CTTTTCAATT ACGTGCCGCT GTTGAACAAC GTGAGTTCGA AAAAATTGTT TGCTGGAACT TCCACCCTGA GCAAATACCT AAGCTTGCTG CGGTGGCTGA AGAATTAGGT TTACCGTTTG AATCAGTAAC GCGTGAAGAG CTTTGTGCTC AAGCGGATGT CATTATTACC ATTACTTCAG CGTTTGAGGC GCTAATAGAT AAAGACTGGA TCAAGCCCGG TACTCACATT GCGTGTATGG GAACCGACAC TGTAGGCAAG CAAGAAGTTG ATGCTAAGCT ACTGGCAGTA GCTAAGGTCT TTACCGATGA ATTAGCGCAA TCAATTACTC TGGGTGAAGC TCAACATGCG ATTGCACAAA AGCTCATTCA ACAAAGCGAC ATTGTGCCAA TTGGCGAAGT AATTAACGGT ACTAAAACCG GCCGAACATC AGCAGAAGAT ATTACTTTGT TTGATGGTAC TGGTGTTGGC TTACAGGATT TAGCTGTAGC CTCAGTCGCT GCTGAATTAG CTGAAGCTAA AGGGCAGGTT ACTTACTTCA ACTTATAA
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Protein sequence | MSDSKENHAP ENHSHKNSLP VNKGVSVVSE AVCQEVMGRA DAFTAVENVF SAMAKNTAYN FPVIREAIGH ADALYGFKSG FDRDGMVLGL KSGGYWPGNV QKDLTNHQST VILFDPDTGQ LKSLVGGNYL TAVRTAASSA VSIAHLARKD SKVLGMVGAG HQSTFQLRAA VEQREFEKIV CWNFHPEQIP KLAAVAEELG LPFESVTREE LCAQADVIIT ITSAFEALID KDWIKPGTHI ACMGTDTVGK QEVDAKLLAV AKVFTDELAQ SITLGEAQHA IAQKLIQQSD IVPIGEVING TKTGRTSAED ITLFDGTGVG LQDLAVASVA AELAEAKGQV TYFNL
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