Gene CPS_4434 details

Gene Information

• Locus tag: CPS_4434
• Symbol: gmhA
• ID: 3522911
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Colwellia psychrerythraea 34H
• Kingdom: Bacteria
• Replicon accession: NC_003910
• Strand: +
• Start bp: 4673967
• End bp: 4674557
• Gene Length: 591 bp
• Protein Length: 196 aa
• Translation table: 11
• GC content: 39%
• IMG OID: 637286874
• Product: phosphoheptose isomerase
• Protein accession: YP_271082
• Protein GI: 71282437
• COG category: [G] Carbohydrate transport and metabolism
• COG ID: [COG0279] Phosphoheptose isomerase
• TIGRFAM ID: [TIGR00441] phosphoheptose isomerase

Plasmid Coverage information

• Num covering plasmid clones: 12
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGCTAGAAC AGATCAAAAA CAATTTTACC GAGAGCATTC AAACACAAAT AGCTGCTAGC 
GAGTTGTTAG GACCATCTAT TGAACATGCT GGTATGATGA TGGTTCAATG CTTGCTTGGC 
GGCAATAAAA TTATCTCTTG TGGCAATGGT GGCTCTGCTG GCCATGCCCA ACATTTTTGT 
GCCCAATTAC TCAACAAATA TGAAACTGAA CGCCCTAGCC TGCCAGCAAT ATCTCTAAAC 
AGTGATATAT CAACCATTAC TTCAATCGCT AATGATTACC AATATGATGA AGTTTTTTCC 
AAACAGATAA GAGCCCTTGG TCATAATGGC GATGTATTAT TAGCTATTTC TACCAGTGGT 
AACTCACGAA ATGTAGTTAA AGCTATTGAG AGTGCAGTAT CTCGTGATAT TCCAATTATT 
GCCTTAACAG GATTCGACGG TGGTGATATT TCAGGATTAT TAGGTGAAGG CGATGTTGAA 
ATCCGCGTTC CATCAGCAAG AACCTCTAGA ATTCAGGAGG TTCATTTAGT TGTATTGCAT 
AGTTTATGTG AGATTATTGA TACTACCCTA TTCCCGCAAG GTGATTCATA A 

 

Protein sequence

MLEQIKNNFT ESIQTQIAAS ELLGPSIEHA GMMMVQCLLG GNKIISCGNG GSAGHAQHFC 
AQLLNKYETE RPSLPAISLN SDISTITSIA NDYQYDEVFS KQIRALGHNG DVLLAISTSG 
NSRNVVKAIE SAVSRDIPII ALTGFDGGDI SGLLGEGDVE IRVPSARTSR IQEVHLVVLH 
SLCEIIDTTL FPQGDS