| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CPS_3755 |
|---|
| Symbol | |
|---|
| ID | 3520013 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Colwellia psychrerythraea 34H |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_003910 |
|---|
| Strand | - |
|---|
| Start bp | 3914136 |
|---|
| End bp | 3915485 |
|---|
| Gene Length | 1350 bp |
|---|
| Protein Length | 449 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 37% |
|---|
| IMG OID | 637286202 |
|---|
| Product | MotA/TolQ/ExbB proton channel family protein |
|---|
| Protein accession | YP_270422 |
|---|
| Protein GI | 71279554 |
|---|
| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
|---|
| COG ID | [COG0811] Biopolymer transport proteins |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 7 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAAAAAAG TTATTAATTT TGTATTGCTA GCAGCGTCTT TGACGACTGG TTTTGTAGCA
ACAACTCAAG CAAATGAATT AGATGATTTA CTAAAACAAG TTAAAGCTGA CCGTGTATCA
GAAGCTAAAC TTGATAAAAA ACGTGAAGCT GAATTTTTGT CTGCACGCGC TGATAAAACT
GCTTTATTAA ATAAAGCGAA AAAAGAATTA TCAGATCAAA ACGTACGTAA CAAACGTTTA
ACTAAAGAAT ATGCTGCTAA TGAAATTACG TTAGCACAAA AAGAAGTTGA ATTAGATAAT
GCGACTGGTA CTTTAGGTGA AATGTTTGGT GTTTCACGTG CTGCAGCAGC AAATGCATTT
GGTCAAATTA GTACTTCAAT TGTAAGTGCT GAATTTCCTA ACCGTGGTGA AGCGCTTAAT
CGCATCGCTA ACGCAAAAGA AATCCCAAGC ATTTCTGATT TAGAAGAACT ATGGTTTTCT
TTACAAACCG AAATGACTGA ATCAGGTAAA ATCTCACAGT TTAGTGTTGA TGTTACTAAT
TTAGATGGTA CTAAATCTAC TGAAACGATT ACTCGTATCG GTACGTTTAA CTTAGTATCA
GCTAACGGTT ACTTAACTTA CAACGATGAA GTTTCTCAAG TACAGCCTTT ACCTAAGCAA
CCTGCAGGTT ACATAACTGA TACGGCCTCA AACTTCTCTG GTGTAACTTC TGGTTATGCA
GCTGTTTACG TGGATCCTTC ACGTGGCGGT ATCTTATCTC TAGAAACTCG TAAGAAAACG
TTAGAAGAGT TTTTCCACGA AGGTAAAGAA GTTGGTTATG CCATCACGGT ATTATTAATC
TTTGGTGTTA TCATTGCACT TGAACGTTTA ATCGTTTTAG GTGGCATGAG CTCTAAAATT
AAATCTCAAG AGAAAAATCT TGATAAGCCA AATGAAAACA ACCCTCTTGG TCGTTTACTT
AAAGTTTTCT ATGATAACCA ATCAGTAGAT GCTGAAACGT TAGAGCTTAA ACTTGATGAA
GCTATTCTTC GTGAAACCCC TAAGGTTGAC CGTGGTATTA ACTTAATCAA AATGTTTGCC
GCAATAGCTC CTCTAATGGG TCTATTAGGT ACTGTTATTG GTATGATCAT GACTTTCCAA
ACGATAACCT TGTTTGGTAC TGGTGACCCG AAAATTATGG CTGGTAACAT CTCTCTTGCT
CTTGTAACTA CAGCATTAGG TCTAATTTGT GCACTTCCAC TTATCTTAAT CCACTCAGTT
GTTGCTGGTA AGAGTAAGTC AGTGTTACAA AAATTAGACG AGCAGAGCGC TGGTTTAATC
GCTGCTATTG CAGAGAAGGG GTCTAAATAA
|
|---|
| Protein sequence | MKKVINFVLL AASLTTGFVA TTQANELDDL LKQVKADRVS EAKLDKKREA EFLSARADKT
ALLNKAKKEL SDQNVRNKRL TKEYAANEIT LAQKEVELDN ATGTLGEMFG VSRAAAANAF
GQISTSIVSA EFPNRGEALN RIANAKEIPS ISDLEELWFS LQTEMTESGK ISQFSVDVTN
LDGTKSTETI TRIGTFNLVS ANGYLTYNDE VSQVQPLPKQ PAGYITDTAS NFSGVTSGYA
AVYVDPSRGG ILSLETRKKT LEEFFHEGKE VGYAITVLLI FGVIIALERL IVLGGMSSKI
KSQEKNLDKP NENNPLGRLL KVFYDNQSVD AETLELKLDE AILRETPKVD RGINLIKMFA
AIAPLMGLLG TVIGMIMTFQ TITLFGTGDP KIMAGNISLA LVTTALGLIC ALPLILIHSV
VAGKSKSVLQ KLDEQSAGLI AAIAEKGSK
|
|---|
| |