| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CPS_3537 |
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| Symbol | |
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| ID | 3522070 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Colwellia psychrerythraea 34H |
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| Kingdom | Bacteria |
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| Replicon accession | NC_003910 |
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| Strand | + |
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| Start bp | 3677671 |
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| End bp | 3679017 |
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| Gene Length | 1347 bp |
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| Protein Length | 448 aa |
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| Translation table | 11 |
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| GC content | 40% |
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| IMG OID | 637285985 |
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| Product | lysine decarboxylase family protein |
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| Protein accession | YP_270211 |
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| Protein GI | 71281598 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG1611] Predicted Rossmann fold nucleotide-binding protein |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCATACTC AAATTAATCC GGTTGGAAAT ATGAACTTGC TTTCGCAAGC AGAAGTTGAC
CAACTGCAAC AATCCGTTAG TAGTACCTTA TACACACTTT ATAGAAATTG TTCTCTCGCT
GTCCTCAACG CAGGCTCAAA TACTGATGAT GCCGAAGAAA TTTATCAAAA ATATCTTTCA
TTCGAAATAC AGGTATTAAG ACGAGAGCGT GGCGTAAAAA TTGATTTAAA AAATCCACCA
ACTCACGCTT TTGTTGACGA TAAAATAATC CGAGGTATTA GAGAACATCT ATCGGCAGTA
TTGCGCGATA TTCTTTTTCT CCATAGTAGC TACAGAAGAG TCCCTTCCTC GTCGGAAGGT
ATTACCGATG AAATTTTTGA CATATTAAGA AATGCCGATC TAATATTACC AGAAACTGGG
GCGAACTTAG TCACTTGCTG GGGTGGTCAC TCAATTAAAC ACAATGAGTA TAAATATACT
AAAGATGTCG GTTACCAACT TGGTTTACGC GGATTTAACA TATGTACAGG TTGTGGTCCA
GGCGCAATGA AGGGCCCTAT GAAAGGCGCA ACCATTGGCC ACGCTAAGCA ACGTATCAAA
GAAGGACGTT ATATAGGCTT AACCGAACCA AGCATTATTG CAGCAGAGCC ACCAAACGCA
ATAGTTAATG AATTAGTAAT CATGCCCGAT ATTGAAAAAC GCTTAGAAGC ATTTGTACGC
ATGTCACACG GCATAATTAT ATTCCCGGGT GGAGCTGGAA CGGCCGAAGA GCTGCTCTAT
ATTTTGGGCA TTATGCTTAA CGAAAATAAT TCGGAGCAAC AGTTACCTAT TATTCTGACA
GGGCCTGCAA GCGCTGTTGA ATATTTTAAT GAAATAGATC TTTTTATTGG CGCCACTCTT
GGCAAAAAAG CACAGTCGCT GTATCAAATA GTCGTTGATG ATGCTGTTAA AGTAGCCCAA
GTAATGAAGC AAGGTTTAGA TAAAGTACTT GCACATAGAA AAGCAACAGG TGATGCCTTT
CACTTTAATT GGTCACTTAT GATTGCCGAT GACTTCCAAC ACCCTTTTGA GCCTACACAT
GAAAATATGG CAAATCTAAA CATTAGTAAC GAACTCCCTA CGGCTGAACT CGCTGCTAAT
TTGCGCCGCG CCTTTTCAGG GATAGTTGCA GGTAACGTAA AATCAGGGGG CATCAAAGCA
ATTAGAGAAT TTGGTCCTTT TGAAATATCT GGGGATAAAA AGATCATGGC GCTAATGGAT
AAACTACTTG CCTCGTTTGT AACACAACAA CGTATGAAGT TACCTGGTAG TGAGTATATT
CCCTGTTATA AAGTTATTGA GGGTTAA
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| Protein sequence | MHTQINPVGN MNLLSQAEVD QLQQSVSSTL YTLYRNCSLA VLNAGSNTDD AEEIYQKYLS
FEIQVLRRER GVKIDLKNPP THAFVDDKII RGIREHLSAV LRDILFLHSS YRRVPSSSEG
ITDEIFDILR NADLILPETG ANLVTCWGGH SIKHNEYKYT KDVGYQLGLR GFNICTGCGP
GAMKGPMKGA TIGHAKQRIK EGRYIGLTEP SIIAAEPPNA IVNELVIMPD IEKRLEAFVR
MSHGIIIFPG GAGTAEELLY ILGIMLNENN SEQQLPIILT GPASAVEYFN EIDLFIGATL
GKKAQSLYQI VVDDAVKVAQ VMKQGLDKVL AHRKATGDAF HFNWSLMIAD DFQHPFEPTH
ENMANLNISN ELPTAELAAN LRRAFSGIVA GNVKSGGIKA IREFGPFEIS GDKKIMALMD
KLLASFVTQQ RMKLPGSEYI PCYKVIEG
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