| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CPS_3413 |
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| Symbol | |
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| ID | 3522409 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Colwellia psychrerythraea 34H |
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| Kingdom | Bacteria |
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| Replicon accession | NC_003910 |
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| Strand | - |
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| Start bp | 3542479 |
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| End bp | 3543738 |
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| Gene Length | 1260 bp |
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| Protein Length | 419 aa |
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| Translation table | 11 |
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| GC content | 39% |
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| IMG OID | 637285861 |
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| Product | putative branched-chain amino acid ABC transporter, periplasmic branched-chain amino acid-binding protein |
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| Protein accession | YP_270088 |
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| Protein GI | 71281937 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0683] ABC-type branched-chain amino acid transport systems, periplasmic component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAATAGCA TTAAAAACAA AAAATTATTA CTAAGTTCAA TTACTACTTG TATTGCTTTA
AGTTTTACTA GCCAAGTTCA AGCAGAAGAT TCTGTTTTTG TTGGCCATTT AGCCGACATG
TCAGGCCCTA CTGCTTTTGT TGGTAAAAAT TATGCCAATG GTGTGCGTGA TTCACTTGCT
TATATAAATG CCCATGGTGG TATTGACGGT ACTAAACTTA GATCTGAAAC CATTGATTAT
GGTTATAAAG TTCCACAAGC CATTGCTGCT TATAAAAAAT GGAAATCACG CGAAGGCATG
GTTGCTATGC AAGGTTGGGG TACAGCGGAT ACTGAAGCAT TAATCTCGTT TGTTGCTCGT
GATAAAACAC CGGTTTTCTC AGCGTCTTAT TCTGGGCATT TAACAGACCC TACAGGTAAA
AACCCTCATA CGAAAAAACC TGCACCTTAT AACTTCTTTT ATGGCGCATC TTACTCAGAT
GCTTGTCGTG GTTTAGTGCA ATGGGCATCG GATGATTGGA AAAGCAAAGG CAGTAAAGGA
AAGCCAAAAT TTACTCATAT TGGTGCAAAC CATCCATTCC CAAATGCGCC TAAAGCGGCT
TGTGCAGAAT ATGCAGAAGA GCTTGGCTTT GATGTTTTAC AACCAGTAGT TGTTTCTATG
AAACCAGGTG ATTTTAAAGC GCAATGTTTA AGCATTAAAA GCTCTGGTTC AAATTACGGT
TATGTTGCGA ACATAGGTGG TTCAGTACTG TCGTTAATTA AATCTTGTGA CACAGTCGGT
GTAGATATTC AATTTATGTC AAGTATCTGG GGTGGCGATG CAAATATGTT CAATGCTGCA
GGTTCAGGTA TCAAAGATTA CATCTTCCCA ACGATGACAC CATTTTGGGG TGACGATGTA
CCAGGTATGA AATTGGTACA TGAAATTTCC AAAATGTCAG ATAAATCAGG CGAAGAACAG
CGCGTTCATC ACTACATGCG TGGCGTATGT TCAACATACT TCATGAAAGA AGCGATGGAA
TGGGCTAAAA AGAACGGTGG CATCACTGGC GAAAATGTTA AAAAAGGCAT GTACGTTAAC
AAAAACTGGG TACCTAAAGG TCTAGAAGGC GTATGTTTAG CTGCTAATTG GAGTAATGAA
GATCATCGTG GTATTAACCA AGTAAATATC TATAAAGGTA ACTACGAAAA CGGTGGTGTT
AAAGTTGAAA AAGTATCACA AGTTACCTTG GAACGTCGTG ATGATTGGTT AGGTTACTAA
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| Protein sequence | MNSIKNKKLL LSSITTCIAL SFTSQVQAED SVFVGHLADM SGPTAFVGKN YANGVRDSLA
YINAHGGIDG TKLRSETIDY GYKVPQAIAA YKKWKSREGM VAMQGWGTAD TEALISFVAR
DKTPVFSASY SGHLTDPTGK NPHTKKPAPY NFFYGASYSD ACRGLVQWAS DDWKSKGSKG
KPKFTHIGAN HPFPNAPKAA CAEYAEELGF DVLQPVVVSM KPGDFKAQCL SIKSSGSNYG
YVANIGGSVL SLIKSCDTVG VDIQFMSSIW GGDANMFNAA GSGIKDYIFP TMTPFWGDDV
PGMKLVHEIS KMSDKSGEEQ RVHHYMRGVC STYFMKEAME WAKKNGGITG ENVKKGMYVN
KNWVPKGLEG VCLAANWSNE DHRGINQVNI YKGNYENGGV KVEKVSQVTL ERRDDWLGY
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