Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | CPS_3343 |
Symbol | |
ID | 3519238 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Colwellia psychrerythraea 34H |
Kingdom | Bacteria |
Replicon accession | NC_003910 |
Strand | - |
Start bp | 3467824 |
End bp | 3469734 |
Gene Length | 1911 bp |
Protein Length | 636 aa |
Translation table | 11 |
GC content | 39% |
IMG OID | 637285792 |
Product | putative acylase |
Protein accession | YP_270019 |
Protein GI | 71279270 |
COG category | [R] General function prediction only |
COG ID | [COG2936] Predicted acyl esterases |
TIGRFAM ID | [TIGR00976] putative hydrolase, CocE/NonD family |
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Plasmid Coverage information |
Num covering plasmid clones | 3 |
Plasmid unclonability p-value | 0.843899 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTATACCT CTATTAAAAT ATTCAAATCA TCAATTAAGT GTTTTATGTT GATTTTATTC GCGCTAAATA CGCAATTATT AATGGCACAA AGCATTGATG AAAAACTAGC TAAAGAACAA TTAACCGCCT CTAGCACTTC ACTTTATTTA ACTATGCGTG ATGGTGTACG TATTGCGGTT GATGTTCATT TGCCAACGTC ATATAAAAAA GGCGATAAAC TACCCGTATT ACTCTATCAA ACTATATATC AACGCTCTTC TAGAGTGCCA TTAGTAAAAA ATCCTGATAT CGCAAAAGCG AGTGATTGGA AAGCTAGTCC TAAATTAGAT CATAAAGAAA GTAGTCCAAT AGAATTTTTA GCACTGAATA ATGGTTACGT GGTCATTAAA ACGGATGTTA GGGGAACGGG TGCTTCTTTT GGTCATAGAA ACTCTCCTTT ACCTTTAGAA GAGATTCAAG ATACTTCCGA CATTCTTGAT TGGATTACTG AACAACCGTG GTCTAACGGT AACGTAGGTG CTTATGGCAT TTCTTATACG GGTATGACAG CTGGCATGGC CGCAACAGTT CAGCACCCCG CATTAAAAGC CATAGTGCTT GGTTGGTCGG CTATTTATGA CGAATATAAA AGCGCTATGC AGCCTTTTGG TTTCGTGCAA CCAGGCGTAG TGTGTCAATG GAGTGATTTG TTAACTGCTT TATGGAGTAA CGATTACAAA AAAGCAGGAA AGGGTATTAT GCCTGTTGAT GGTGATGAAA ATTCGATCTT ATTAAAACAA GCGATTAAGG AGCATCAACG TAATGAATCA GTATGTGACT TATTAACACC GCTCGTTTAT AGCGATGATA AAATAGGTAA AGATAAATTA AGTGTTCAAA CTTTTTCTCA GCGTGATTCT AAAAAAGAAA TCGAAGCGTC AGGAGTGGCA ATGTTGTCTC TGGCAAGCTG GTACGACACT GGCGCAGTGG ATGCGCATTT TGTCCGTATG CAACACTTTT CTAATGAACA AAAAATATTC TTAACGGGTG GACAACATGG TGCACGCTCT CATGCGAGTC CTTATACCGT GAGTGACAAA GTTATTCCTC CAATACCTTC AGGTGACGTG ACTTGGGGTA AAGCAATTAC CTTTTTTGAT TATTACTTAA AAGGCTTAAA AAATGATTAC CCTTCGTGGC CAAAAGTAAC GTATTGGAAC TTAGGTGAAG AAGCATTTAA AACCTCGGAT GCTTGGCCAA TTGAAAATAC TAAAAACAGT CGTTTTTATT TTGATAAGCA ACAAGCCTTA ACGAGTAAAC GTCCGAATTA CGTTCAAGAA AGTGACCGTT ATCAAGTTGA CTTTTCATCG ACAACTGGTA GAAATTCTCG TTGGTGGTCA GGTATCGGTT ACCCAATGTT GAACCTTAAT GCACGCCAAG AAGAAGATAA AAAACTATTA ACGTATACGA GTGAACCGCT TACTGAAGAT ATGCAAATTA CTGGCTGGCC AGTTATTTCA TTAACTGTAT CGTCTACACA TAGCGATGGT GCCTTTATTG CGTATTTAGA AGATATTGAC GAGCAAGGGA ATAGTATTTA CGTTAATGAA GGCGGCTTAA GAGCAATTCA TAGAAAAGTA ATAACTAACC CCGTTGCTGC TTTAGCACAC CTTCCTTACC ATAGTTTCAA AAAAGAAGAT GCGCAGCCAC TTGTGCCTAA TAAAGTTAGC GAAATAAAGT TTGAAATGAT CCCCACCTCA GTAAAAATTG CTAAAGGGCA CCGTATTCGT ATTGCCATAG CTGGGGCAGA CAAAGACAAC TTTGTTCGAA TACCAAGTCA AGGTCAACCA ACCATTAAGG TCTATCGTGG CGGAGATAAA CCATCCTATG TTGATTTTCC TGTGGTTAGC AAAACAACTC AACTTGATTA A
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Protein sequence | MYTSIKIFKS SIKCFMLILF ALNTQLLMAQ SIDEKLAKEQ LTASSTSLYL TMRDGVRIAV DVHLPTSYKK GDKLPVLLYQ TIYQRSSRVP LVKNPDIAKA SDWKASPKLD HKESSPIEFL ALNNGYVVIK TDVRGTGASF GHRNSPLPLE EIQDTSDILD WITEQPWSNG NVGAYGISYT GMTAGMAATV QHPALKAIVL GWSAIYDEYK SAMQPFGFVQ PGVVCQWSDL LTALWSNDYK KAGKGIMPVD GDENSILLKQ AIKEHQRNES VCDLLTPLVY SDDKIGKDKL SVQTFSQRDS KKEIEASGVA MLSLASWYDT GAVDAHFVRM QHFSNEQKIF LTGGQHGARS HASPYTVSDK VIPPIPSGDV TWGKAITFFD YYLKGLKNDY PSWPKVTYWN LGEEAFKTSD AWPIENTKNS RFYFDKQQAL TSKRPNYVQE SDRYQVDFSS TTGRNSRWWS GIGYPMLNLN ARQEEDKKLL TYTSEPLTED MQITGWPVIS LTVSSTHSDG AFIAYLEDID EQGNSIYVNE GGLRAIHRKV ITNPVAALAH LPYHSFKKED AQPLVPNKVS EIKFEMIPTS VKIAKGHRIR IAIAGADKDN FVRIPSQGQP TIKVYRGGDK PSYVDFPVVS KTTQLD
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