| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CPS_3163 |
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| Symbol | |
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| ID | 3523058 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Colwellia psychrerythraea 34H |
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| Kingdom | Bacteria |
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| Replicon accession | NC_003910 |
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| Strand | + |
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| Start bp | 3293642 |
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| End bp | 3295714 |
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| Gene Length | 2073 bp |
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| Protein Length | 690 aa |
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| Translation table | 11 |
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| GC content | 39% |
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| IMG OID | 637285612 |
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| Product | TPR domain-containing protein |
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| Protein accession | YP_269859 |
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| Protein GI | 71282583 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG5271] AAA ATPase containing von Willebrand factor type A (vWA) domain |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 1 |
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| Plasmid unclonability p-value | 0.185864 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTCGGCAC AACAAACCAA CTTATTCACT GATTTAACTC AATTCGCTAA CGACTTCTCT
TTCGAAGGCC TTAGCTTCGA AGGGTTAGTC AATAACTTCC ACTTTATTCG ACCTTGGTGG
TTATTAGCCT TTATTGCTTT GTTTTTAATA CTGTTTATTT TAAAGAAAAT TCGTTATTAC
CAATCACCTT GGCAACATTT TTTACCTGCT CACTTAGCCA ATGCTTTATT GGAAAATTCG
CAAAACAAAG GGGCACAAAC CTCTTCGTCA CAACCACGTT TTTGGTTAAA ACCTTTTATT
ATGGGTAGTT CTATTATTTT AGCTCTAGCT GGACCTGCAT GGCAAAAGTT ACCACAACCG
GTTTATCAAC TAGAACGTGG CGCTGTGCTT GTTATGGATA TGTCTTACTC CATGTACGCA
ACGGATGTGA AACCCAATAG GTTAACCCGT GCTCGTTATA AAGCCATCGA TTTACTTAAA
AAGATCAACG AGGGTGATGT TGGTCTAATT GCCTATGCCG GTGATGCTTT TATTATTAGT
CCTTTGACAC AAGATATTAA AAACATAGAG TTACTTTTAC CTTCACTATC ACCTGATATT
ATGCCGGTTT ATGGCGCTAA TGCATTGGCT GCACTGACTC TAGCGGATAA AACATTAAAA
AATGCCGGTC ATGTGAGTGG CGATATTTAT TGGTTTACTG ATGATATTGA TAAGGAAGAA
ATGTCAGATA TTTATGATTG GGCTAACGAC AACGACCATA AAGTGAATAT CTTAGGTGTA
GGTAGTAAAA CCGGCGCACC AATAAAGCTA AGTAGTGGAA AATTACTCAA AGATAACAAA
GGTGCTATCG TCATTCCTAA GTTACCTGAA AGTAGATTGG CGGCAATATC TAAGCGCAGC
AGAGGCGTCT ATCACACCAT GACCAATGAC GACACCGATA TAAAAGCGCT GACCGCTCAT
TTAAATTCAA ATCTAGACGA TAAGATTAAT TCACAGTCAT CAAATAATAA AAATGGTCAG
CAAAGCGAAC AACAAAATAA ACAAGCAATG CAAGGAGATC AGTATCAAGA GCAAGGACCT
TGGTTACTCA TCATCATATT GCCATTACTG TTAACTTATT TTCGCCGTGG TAGCAGCATA
TTGGCAATAA CTTGGCTTAT GCCACTGACT TTATTGTTCA GTCTTTCATC TATCAGCCCT
GTCAGCTTTG CCGCTTCAGA TTCTGAAACA GTAAAATCTA GTGATGCATC TACGAGTGAG
CCTAACGTTA ATAGCGCTAG TCAACTTTGG CAAGACTTGT GGAAAACCTC AGACCAACAA
GCACAACAGC ATTACCAACA AGAGAACTAT CAGCAAGCTG CTAAGCAGTT CAAAGTCAGC
CAATGGCAAG GCAGTGCTCA CTATAAAGCG GGGGATTATG AACAAGCATT ACAAGCTTTC
AAACAAAGTG ATAATGCTCA ATCGCTTTAT AACCAAGGTA ATTCGCTCGC ACAGCTACAA
AAAGTTGATG AGGCGATTGA TGCTTATAAA AAAGCACTTG AAAAAGATCC TGAGTTAAAT
GATGCCAAAG ACAATTTAGC AAAACTAGAA GAACTTAAAA AACAACAAGA ACAGCAAGAA
CAACAGTCTC AAGGTGATCA GAAAGGTCAG GACTCTCAAG ATCAATCGGA GGGGGATGAA
CAAGATAAAA AAGAGAATCA AGAGAGTCAA CAAAGTAAGG ACGGTCAAAA AGAACCTCAA
GATCAGTCCC AAGGTGACCA AGAACAGAGT GACCAGCAGC AACAAGAACA AGACGATAAA
CAGGACAAGC AGGATCAAGA TGCTCAGCAA CAAGCGAAAA ATGAACAGCA AAAAGAAGAT
CAAGCTAAGC AAGCCGAAGA TTCTGATGAT GAGCAAGATC CAAGTGATGA GAAATCTTTA
GCTCAACAAG CCAGTGATAG CAAAAAACAA GAAACTGAGC AAAAACATCA ACAACTATTA
AATAAGGTAA CAGACGACCC TTATTTATTA TTACGAAATA AATGCGTCTC GAATATCAAA
AGCGCCGAAG TGAAGGGTCA TCTCAGGGAG TAA
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| Protein sequence | MSAQQTNLFT DLTQFANDFS FEGLSFEGLV NNFHFIRPWW LLAFIALFLI LFILKKIRYY
QSPWQHFLPA HLANALLENS QNKGAQTSSS QPRFWLKPFI MGSSIILALA GPAWQKLPQP
VYQLERGAVL VMDMSYSMYA TDVKPNRLTR ARYKAIDLLK KINEGDVGLI AYAGDAFIIS
PLTQDIKNIE LLLPSLSPDI MPVYGANALA ALTLADKTLK NAGHVSGDIY WFTDDIDKEE
MSDIYDWAND NDHKVNILGV GSKTGAPIKL SSGKLLKDNK GAIVIPKLPE SRLAAISKRS
RGVYHTMTND DTDIKALTAH LNSNLDDKIN SQSSNNKNGQ QSEQQNKQAM QGDQYQEQGP
WLLIIILPLL LTYFRRGSSI LAITWLMPLT LLFSLSSISP VSFAASDSET VKSSDASTSE
PNVNSASQLW QDLWKTSDQQ AQQHYQQENY QQAAKQFKVS QWQGSAHYKA GDYEQALQAF
KQSDNAQSLY NQGNSLAQLQ KVDEAIDAYK KALEKDPELN DAKDNLAKLE ELKKQQEQQE
QQSQGDQKGQ DSQDQSEGDE QDKKENQESQ QSKDGQKEPQ DQSQGDQEQS DQQQQEQDDK
QDKQDQDAQQ QAKNEQQKED QAKQAEDSDD EQDPSDEKSL AQQASDSKKQ ETEQKHQQLL
NKVTDDPYLL LRNKCVSNIK SAEVKGHLRE
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