Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | CPS_3085 |
Symbol | |
ID | 3520461 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Colwellia psychrerythraea 34H |
Kingdom | Bacteria |
Replicon accession | NC_003910 |
Strand | - |
Start bp | 3215291 |
End bp | 3217375 |
Gene Length | 2085 bp |
Protein Length | 694 aa |
Translation table | 11 |
GC content | 40% |
IMG OID | 637285536 |
Product | amidohydrolase family protein |
Protein accession | YP_269783 |
Protein GI | 71279998 |
COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
COG ID | [COG1228] Imidazolonepropionase and related amidohydrolases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 4 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCAAATTC AAAAACCGAT GAAAGCTATC CAATCAATTA TTAGTGTCGT CGTGCTGATG ACCACTTTAG GATGTTCTCA ACAGTATGAG GCAGTAAATA CAGTACAAGT TGCACTACCT AATCAAGAAA AATTTAGATT AATATTAGGT GGTACCGATG TAGGTGGAAT GTTAGTTAAT CGCAATGCTG AAAACATTAT TATTGACTAT TCATATAGTA ATAATGGTCG TGGTTCTAGT AGCAAAGAAG TTCTGAAGTT GTCAGATACA GGTTTACCCA TTGATTGGCG CATTACAGGA AAAACGGTTT TTGGTAATGA AGTTGATGAA CAGTTTAGCT TGCAAGACAA TATGGCGTAT TGGCAGAGTA CAGCTGAAAA AGGCAGTGCA AAATTTAATA ACAGCGCTAT ATACATTGCG CAAAATGCGA GTCCGTATGC GCTTTACATA TACGCTACAG CCTTGCTAGA AAAGCCAAAT CATTCATTAT CTGCATTACC TTCTGGCGAA CTTACAATCA CCCAAGTCGA CAAGGTTGAC CTTAAAGATA TTAGCGGTGT GTTGGTCAAT GCGACTATTT ATGCAATCAA TGGCATTGAA CTGGATCCTA GCTATATAGC ACTTGATGAG AACCAGCATA TGATTGGTTA TTTGTCGCCA CGTGCTGTTG TGATTCGTGA AGGATTAGAA CAACAAAGTA AGATCTTAAG CGATTTAGCG GCTAGCTTGA ACGCAAGTCG ATTTGAAAAA ATAGCGAAGA AAACGACGCA CCTATATGAG AAACCCGTGC GTATTAACAA TGTCAGAATA TTTGACCCAG TTAACATGCA ACTTACTGAT TCTCAATCAG TGCTGATTGA GAAAGACAAA ATTACAGCTA TCGAGCCATT GGTTGATATT CCTAAAGAAG GAGAAATTCT GATTGATGGT AATGGCGGTA CATTAATCCC AGGATTATAT GAAATGCATG GCCACATGAG CGATAACGAC GCCCTACTTA ATGTGATGGC AGGAGTGACT TCTGTTCGAG ATATGGGTAA TGAGATTGAA ATACTAGATC CTTTAATCGA AAAAATTGAA AGTAATCAAA TCATCGGTCC ACGCATTACT AAAAGTGGCT TTATTGAAGG AAAAAGCGAA TTTTCAGCTG CCACTGGAGA AATTGCTTCA ACTGAACAAG AAGCCGTTGA TCTTGTGAAT ACGTATGGTG AAAAAGGTGG TTATTTCCAA ATCAAGATAT ACAGTTCTAT TAATGGTGAG TGGGTGCCAG CCATGGCGAA AGCAGCAAAG AAACACGGCA TGCGAGTAAC AGGACATATT CCCGCATTCT CAACAGTTGA TGAAATGATT GCCGCAGGGT ATGACGAAAT CACCCACATA AACCAAGGTA TGCTCAGCTG GGTACTAGAT CGAGATGAAG ATACTCGAAC ACTTTATCGC ATTACGGGAA TGAAACGTTT TGTCGACTTG GATCTCAATA GCGAAAAAGT ACAGAATACC TTAAACACCA TGGTCGAAAA AAATATAGCG GTTGATCCCA CCATTGTCAT TCATGAATTT GGCTTAACGG CCAGAAATGG TAAAACTCGC ATTGGCACAA AAGATTATAT CGACAATATG CCTGTCGGAG TTCAAAGACA AGCGAAAGTC GGTTTATTAA ATGTTGCTGA TCAAGAAGAG GATAAGGCTT ACCAGTTGGC TTTTGATAAA GTTATTGAGA CACTCGCATT AATGCATAAA AAGGGAATTT TCCTCGTTCC AGGTACCGAT CTAGGTGGCG CTTTTGAGCT GCACAGAGAG TTAGAACTAT TCAAAAAAAT TGGTATGTCT AACGTTGAAG TATTGCGCAG AGCTTCTTAT GACATGGCTA ATTATTTAGG CTATGGTGAT CAACTTGGCA GTATTGAAGT CGGAAAACTG GCTGACTTTT TCTTAGTGCC TGGCGACCCA ACAGCAGACC TTCGCGCTAT CAAGACTGTG TCAATGGTTT CAAAAGGTGG TGTGATTTAT TTCCCAAGTG AAGTTTACCC TGAGTTTGGA ATCAAGCCAT TCACGACAAT ACCCACGATC GTTGAGAGCA ATTAA
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Protein sequence | MQIQKPMKAI QSIISVVVLM TTLGCSQQYE AVNTVQVALP NQEKFRLILG GTDVGGMLVN RNAENIIIDY SYSNNGRGSS SKEVLKLSDT GLPIDWRITG KTVFGNEVDE QFSLQDNMAY WQSTAEKGSA KFNNSAIYIA QNASPYALYI YATALLEKPN HSLSALPSGE LTITQVDKVD LKDISGVLVN ATIYAINGIE LDPSYIALDE NQHMIGYLSP RAVVIREGLE QQSKILSDLA ASLNASRFEK IAKKTTHLYE KPVRINNVRI FDPVNMQLTD SQSVLIEKDK ITAIEPLVDI PKEGEILIDG NGGTLIPGLY EMHGHMSDND ALLNVMAGVT SVRDMGNEIE ILDPLIEKIE SNQIIGPRIT KSGFIEGKSE FSAATGEIAS TEQEAVDLVN TYGEKGGYFQ IKIYSSINGE WVPAMAKAAK KHGMRVTGHI PAFSTVDEMI AAGYDEITHI NQGMLSWVLD RDEDTRTLYR ITGMKRFVDL DLNSEKVQNT LNTMVEKNIA VDPTIVIHEF GLTARNGKTR IGTKDYIDNM PVGVQRQAKV GLLNVADQEE DKAYQLAFDK VIETLALMHK KGIFLVPGTD LGGAFELHRE LELFKKIGMS NVEVLRRASY DMANYLGYGD QLGSIEVGKL ADFFLVPGDP TADLRAIKTV SMVSKGGVIY FPSEVYPEFG IKPFTTIPTI VESN
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