Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | CPS_3065 |
Symbol | |
ID | 3520016 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Colwellia psychrerythraea 34H |
Kingdom | Bacteria |
Replicon accession | NC_003910 |
Strand | + |
Start bp | 3199505 |
End bp | 3200218 |
Gene Length | 714 bp |
Protein Length | 237 aa |
Translation table | 11 |
GC content | 34% |
IMG OID | 637285516 |
Product | DNA-binding response regulator |
Protein accession | YP_269763 |
Protein GI | 71279557 |
COG category | [K] Transcription [T] Signal transduction mechanisms |
COG ID | [COG0745] Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 1 |
Plasmid unclonability p-value | 0.00140102 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTTCTTAT TACCTACAAC CGTACTCAAT GAAAAAATGC ATATATTAAT TATTGAAGAT GACAAAGAAA TTGCTCGACT GACTGAAATA TATTTACAAA GCACAGGTTA TGAAACCACT ATTATTGCTG ATGGAAGTTT AGCTATAGCG ATGATAAAAA AGTTATCGCC AGACCTTATT TTGCTTGATT TAATGTTACC TGGCGTTGAT GGCTTTGAAT TATGTAAACA AGCACGCGAA TTTTATAATG GGCCAATAAT TGTATTAACC GCCATGGAAG ATGATCTGAG CGAAGTGAGT TTATTAAAAC TTGGCGCGGA TGATTATTTA AGAAAACCGG CAAAACCTCA TATTATGTCA GCCAGAATAG AGGCTTTATT ACGTCGTGCT AAGGTTAACA ATGAAAAAGT AACACAAGAA TTACCTAATA AGTTGTTAAT TAACCGAGAT ACTTTATCGG TAACGTTAAA CAACGCCCTA GTTGATTTAA CTAACTCTGA ATTTGATATG TTAGTACTGC TCGCTGATAA ATCAGGACAA ACGGTTTCAC GAGAAGAGTG TATTCACTCA TTACGAGGTA TTGATTTTGA TGTAACTAAC CGCTCGATAG ATATGCGTAT ATCAGCACTT AGAAAAAAAC TTAATGACGA AAAATCTCCC TATAAACTGA TTAAAACAAT TCGAAATAAA GGGTACTTAC TCGTCAATGA ATAA
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Protein sequence | MFLLPTTVLN EKMHILIIED DKEIARLTEI YLQSTGYETT IIADGSLAIA MIKKLSPDLI LLDLMLPGVD GFELCKQARE FYNGPIIVLT AMEDDLSEVS LLKLGADDYL RKPAKPHIMS ARIEALLRRA KVNNEKVTQE LPNKLLINRD TLSVTLNNAL VDLTNSEFDM LVLLADKSGQ TVSREECIHS LRGIDFDVTN RSIDMRISAL RKKLNDEKSP YKLIKTIRNK GYLLVNE
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