| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CPS_2987 |
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| Symbol | |
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| ID | 3521690 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Colwellia psychrerythraea 34H |
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| Kingdom | Bacteria |
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| Replicon accession | NC_003910 |
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| Strand | + |
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| Start bp | 3128654 |
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| End bp | 3130990 |
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| Gene Length | 2337 bp |
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| Protein Length | 778 aa |
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| Translation table | 11 |
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| GC content | 39% |
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| IMG OID | 637285440 |
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| Product | TPR domain-containing protein |
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| Protein accession | YP_269687 |
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| Protein GI | 71281219 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG4783] Putative Zn-dependent protease, contains TPR repeats |
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| TIGRFAM ID | [TIGR01905] doubled CXXCH domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 1 |
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| Plasmid unclonability p-value | 0.353968 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTTAAATA ATTTCCTGGA GCATTATTTC CACATGATAA AATCACCAAC AAACGCCTAT
TTTGGACTGC TTTTTTTAGT ACTTAATACT TTTATAGGTC AAAGTTTTGC TCAAACTTTT
GTTGGTTCAA AAGCCTGTAT TGGTTGTCAT GAAAAAGCCT ATCAAGACTG GCAAGGGTCA
CATCATGATA TGTCAATGAA ACATGCCGAT AGCAAAAGTG TTTTAGGTGA CTTTAATAAC
GCCACATTGG CTACCCAAGA TAAAAAGTCT GACAAGCTGA ATACCTTTTT TAAAAAAGGC
CCTCAGTTCT GGGTCAATAT CAAAGGTGAA GATGGTAAGT TTCATGACTA TCAAATTAAA
TATACTTTTG GTTATGAGCC ACTACAACAA TATATGGTTG AGTTCGATGA TGGCCGAGTT
CAGCTGATAC CTTTCGCTTG GGACTCTCGA GTCAAAGAAG AAGGGGGACA ACGATGGTTC
AACCTTTACC CCGATATGAC TGAAAAACAT CAAGAATTCT TTTGGACCAA TACTGGTCAA
AACTGGAACT ACATGTGTGC TGACTGCCAT TCAACCAATG TAGATAAGAA CTTTGATATC
AAAACAGATT CCTACAATAC TACTTTTAGT GAAATTAATG TCGCTTGTGA GAGCTGCCAT
GGGGCCGCCA GTGAACATTT AACTTGGGCT AAGCAATCTA AAGATAAATC TGAAAACACA
ATAAATAACA TGCCATTAGA TGGCAAAGGC TTTAGCCGTG TTTTATCAAA ATCAGTACAA
AACTGGCAAG CAAAAGGCAA TAAAAAAACC TTAACACCAA AAAGTATTGA ACATAGCCAA
CAAGTATTAG TGTGCGCGCA ATGCCATAGC AGACGAACTC AAGTAAGTAC TAACGACCAT
GTAAAAAGTA ATGCCTTTGG TGAGCGTTAT TTACTTGATT TAGTTTCAAG CACCAATTAT
CACCCTGACG GACAAGTCTA CAACGAAGAT TTTGTTTATG GTTCTTTTTT ACAGTCAAAA
ATGTACAAAA ATGGCGTGGT ATGTAGCGAC TGTCATAACC CGCACACTGC ACAATTAAAA
CTTCCAATCG AAACACTTTG CTTGCAGTGT CATCAAAGTG ATAACTACGC ATCAACACAG
CATCATAAAC ATCCTGAAAG CTCTACTGGC GCACAATGTG TTAATTGTCA TATGCCTGAG
ACGACATATA TGGAAATTGA TGCCAGACGT GATCATGGCT TTCATATACC AACGCCTAAT
TTAGCCCAGA AATTAGGCAC ACCTGATACC TGTTTAAGTT GTCATGAGAA TAAAGATAGC
CAATGGAGTG CTAGCAAGGT TAATGCTTGG TATCCTAAAT CAACGGTTGA AACTGAAAAA
GACTTTGTCG CGGTTTTCTC TGCTATTAAC TTAGCGTTAA ATGAGCAACA ACTTCAAGGC
GTTTCCTCAG AGTTATCTCG CATTGCTCAG ACTATCAGTT ATGCTGGCAT TATCCGCGCC
TCTGCATTAA CTAAAATGGC TAGCGTATCT AATACCAATA CTATTATCGC TATTGCTAGA
GCCGTTAAAA ACCCTGATGA AAATATACGA TTAGGTGCAA TCGAAGGGGC TCAAAATATG
GCTGCTGCTG AAAAGTGGCG CATATTATCA CCTTTATTAA ACGACAAAGT GTTATCGGTA
AGAATCAATG CTGCTTTTAC CTTAACCAGT TTGTGGCAAA ACTTATCCGT ACCACAAAAA
GAACAATTAA CACCCGCCCT GAATGAATAT ATCGAAAGTC AGCATTTTAA TAATGATCGT
AGTTTTTCTC ATTCTAATCG AGGAATTATT GCCGCCTATC AAGGACAATA CGATCAAGCC
ATTAAAGCTT TCAAACAAGG CATCGCAATA GAGAAACATT TTGCACGAAC TTACCTTAAT
TTGAGCCAAG TTTATTATCA ACGAGGCGAA AACCAAAAAA GTATTGAAAT ATTGCAGCAA
GGAAAATCCG CAAACCCTGA TGATGCCAGC CTGCCCTATA ATTTAGGACT CGCGTATATT
AGGGTTCAAG ATAAAGTAAA AGCAGCACAA GCATTAGCCA TTGCTACACA ACTTGCCCCC
CAAAATAGTC ATTATTTTTA TGTTTATGGC TTAAGTTTAG AGCAGCAGAA ACCTAGTGCC
GCTTATGGCG CTTTGTATCA AGCATTTCAA CTGAGTAATA ACCCGCAACA TTTATATGCG
CTATGTGACA TGCAAGTCCG CCATAAAAGC GGTTTAGCAA AACAATGTTT AGCACAACTT
GCCCCGTTAG TGCCCAGTAA TGTGATGCAA ACGCTTAGGC AACAGTTAAA TCAATAA
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| Protein sequence | MLNNFLEHYF HMIKSPTNAY FGLLFLVLNT FIGQSFAQTF VGSKACIGCH EKAYQDWQGS
HHDMSMKHAD SKSVLGDFNN ATLATQDKKS DKLNTFFKKG PQFWVNIKGE DGKFHDYQIK
YTFGYEPLQQ YMVEFDDGRV QLIPFAWDSR VKEEGGQRWF NLYPDMTEKH QEFFWTNTGQ
NWNYMCADCH STNVDKNFDI KTDSYNTTFS EINVACESCH GAASEHLTWA KQSKDKSENT
INNMPLDGKG FSRVLSKSVQ NWQAKGNKKT LTPKSIEHSQ QVLVCAQCHS RRTQVSTNDH
VKSNAFGERY LLDLVSSTNY HPDGQVYNED FVYGSFLQSK MYKNGVVCSD CHNPHTAQLK
LPIETLCLQC HQSDNYASTQ HHKHPESSTG AQCVNCHMPE TTYMEIDARR DHGFHIPTPN
LAQKLGTPDT CLSCHENKDS QWSASKVNAW YPKSTVETEK DFVAVFSAIN LALNEQQLQG
VSSELSRIAQ TISYAGIIRA SALTKMASVS NTNTIIAIAR AVKNPDENIR LGAIEGAQNM
AAAEKWRILS PLLNDKVLSV RINAAFTLTS LWQNLSVPQK EQLTPALNEY IESQHFNNDR
SFSHSNRGII AAYQGQYDQA IKAFKQGIAI EKHFARTYLN LSQVYYQRGE NQKSIEILQQ
GKSANPDDAS LPYNLGLAYI RVQDKVKAAQ ALAIATQLAP QNSHYFYVYG LSLEQQKPSA
AYGALYQAFQ LSNNPQHLYA LCDMQVRHKS GLAKQCLAQL APLVPSNVMQ TLRQQLNQ
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