Gene CPS_2654 details

Gene Information

• Locus tag: CPS_2654
• ID: 3522575
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Colwellia psychrerythraea 34H
• Kingdom: Bacteria
• Replicon accession: NC_003910
• Strand: +
• Start bp: 2763898
• End bp: 2765970
• Gene Length: 2073 bp
• Protein Length: 690 aa
• Translation table: 11
• GC content: 40%
• IMG OID: 637285108
• Product: PKD domain-containing protein
• Protein accession: YP_269368
• Protein GI: 71282102
• COG category: [R] General function prediction only
• COG ID: [COG3291] FOG: PKD repeat

Plasmid Coverage information

• Num covering plasmid clones: 3
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGAAAAACT TTAAATTATC GCTAATCGCT ATAGTTGTAT TGTCAACTAC TTTAGCAGGA 
TGTAATGGTT CAGATAAATC ACTAGAGATT ACCCCAAAAA AAGCAGAAAG TGTAACGGCT 
AGTTCTGCAC TACGTAATAT GGCTATAGAT TCAGGCAACA CTATCTCCTC ACCAGACGGT 
GTCAATGTAC CCGGAGGAGA AGGCATAAAT AACTTAATTG ACGGCAACGA TGGCTCTAAG 
TTTTTATCAT TTAGTGACAG TGTATCTGTT GAATTTAGTG CAGCAAAACC TTATGCCTTA 
AAAGGATATG CTTTGATATC AGGTAATGAT GCCCCCGAAC GAGATCCGGC CGAGTGGACA 
GTAGAAGGTT CAGGCGATGG CACAATATGG GTTGAGATTG ATAGCCGTTC TGGCCAGACT 
TTTGGTAGTC GTGGTGAAAA GCGTACCTTT GAAATGCTGA CTAATGAAGT TGAATATCAA 
CATTATCGTT TTAGTTTTGC AAACAACCCA GCGACCGCTG CAGGCATATT CCAATTAGCT 
GAAATAGAAT TGACTGTTGT GGCAGATGCG CCTTTGGTTG ATTTTGCAAG TAATATCTCG 
CGTGCTGAAA TAGGTGAAAA CGTACAGTTT TGGGATAGAT CTTTAGCTAA CCCAACGGGT 
TGGCAGTGGA CATTTGAAGA TGGAGAACCG GCAACGAGCA CGAACAGAAA TCCTGCGGTT 
ACTTTCACTT CACTTGGTGC TAAATCAGTA ACACTGGTTG CGTCTAACGA TAAAGGTTCT 
AATGAAAAGG TACAAGAGCA AGTTGTACAT ATTTGGGATT CTCAAAACCC ATGGGCAGGT 
TATGTAAAAC CTACCGTTAC GCTTGTTGCT CATAAACCAG AGCATGAAGG GCAAATAGCA 
TTTAGTCGAG TTATGCCTGA TATCGAGGCC GTCATTCATG ACATCTCATT ACAGATAGTT 
AAAGTACTGT ATAAAGATGT TGCTGAAGCA CCATTATTTA AAACGGTAAC CTTTGAAACT 
GATGAATATG ACTTCCCTGC TGCTAAGAGT GGTACAGATG AAGACATGAT CTTAATGATG 
GATGTTGCTC ATCTTGCTAA TAAAGCAGCT GAAGGTGATG ATGCCTTGCG CGATGAAGTG 
ATAGGTATGT TATGGCATGA ATTAACCCAT GGTTATAATA ATTCGCCAAA CTCAGGTGAA 
TACGCAACGG GTGATGAATA CCATTCATAT TTAGAGAGTT TAGCTAACTA CATGCGTATT 
AAAGCCGGCT TTCATGAAAG TAGACGTGTT GGTATTAAAT GGGTTGATAA CTGGAATGTT 
GATGCCTATG AGCAAACATC ATTTTTCTTA GAGTGGGTAG CAAATAGCCA TCGTAGCGTT 
GACTTTATCT ATTTATTTAA TAAAGCCGCA GGTGACCTAA AAGAATGGAG TTTTGAGGCC 
GCCTTTAAAT CTATTTTTGG TGAAGACAAG GGCGTATCAA TATTTTGGCA AGAGTATCAT 
GATGCACAGG GTATTGAACC TCCTTATCCA ACACCAGTAG ATGGCTATAG AAACTTTGCG 
GTTGATGAAG GTGTGAGCAT TTCAACTAAT GCTACTACCG TTATTATTCC TGATTGGGAT 
GCATATGAAG GGGAAGATAA ATTAATTGAT AATAACGTTA CCAAAAAATT TAACGCGTTT 
ATTGAAGGTA CATGGTGGCT AGAGGAACAT GCATCTCACT TATTTCCTAT CAATGATATT 
ACCAATGTGG AAGTTACTTT TGAATTACCC GATGCCATTG TTTTACATAA ATACAGTGTA 
ACAACAGGTA ATGATAACCC ACAGCGTGAT CCAACGTTAT GGACTATATC AGGCTCTGTG 
GATGGTGAAG TTTGGACTCA ATTAGATAGC GATAATTATC CTTCTGATCC AGAACGATTA 
ATCACTTTCC ATTATGACAT TGATGATGCA GTGACGGCTT ATAAGTATTA TCAGTTTGTT 
TTTGAAAATA CTCAACCAGC GGGTGATAGT ATTGGTGGTG ATAATGGTCG CTTGGTTCAA 
ATTGGCGAAA TTGCACTACT AACAGAAGAG TAA 

 

Protein sequence

MKNFKLSLIA IVVLSTTLAG CNGSDKSLEI TPKKAESVTA SSALRNMAID SGNTISSPDG 
VNVPGGEGIN NLIDGNDGSK FLSFSDSVSV EFSAAKPYAL KGYALISGND APERDPAEWT 
VEGSGDGTIW VEIDSRSGQT FGSRGEKRTF EMLTNEVEYQ HYRFSFANNP ATAAGIFQLA 
EIELTVVADA PLVDFASNIS RAEIGENVQF WDRSLANPTG WQWTFEDGEP ATSTNRNPAV 
TFTSLGAKSV TLVASNDKGS NEKVQEQVVH IWDSQNPWAG YVKPTVTLVA HKPEHEGQIA 
FSRVMPDIEA VIHDISLQIV KVLYKDVAEA PLFKTVTFET DEYDFPAAKS GTDEDMILMM 
DVAHLANKAA EGDDALRDEV IGMLWHELTH GYNNSPNSGE YATGDEYHSY LESLANYMRI 
KAGFHESRRV GIKWVDNWNV DAYEQTSFFL EWVANSHRSV DFIYLFNKAA GDLKEWSFEA 
AFKSIFGEDK GVSIFWQEYH DAQGIEPPYP TPVDGYRNFA VDEGVSISTN ATTVIIPDWD 
AYEGEDKLID NNVTKKFNAF IEGTWWLEEH ASHLFPINDI TNVEVTFELP DAIVLHKYSV 
TTGNDNPQRD PTLWTISGSV DGEVWTQLDS DNYPSDPERL ITFHYDIDDA VTAYKYYQFV 
FENTQPAGDS IGGDNGRLVQ IGEIALLTEE