| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CPS_2370 |
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| Symbol | |
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| ID | 3518646 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Colwellia psychrerythraea 34H |
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| Kingdom | Bacteria |
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| Replicon accession | NC_003910 |
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| Strand | - |
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| Start bp | 2471549 |
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| End bp | 2472922 |
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| Gene Length | 1374 bp |
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| Protein Length | 457 aa |
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| Translation table | 11 |
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| GC content | 37% |
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| IMG OID | 637284827 |
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| Product | glycosy hydrolase family protein |
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| Protein accession | YP_269088 |
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| Protein GI | 71277768 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG3693] Beta-1,4-xylanase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 4 |
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| Plasmid unclonability p-value | 0.249901 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAACTATC CACTAAAAAC ATTACCGATA ATTGTACCTG CTGCCTTTTG GTTATTATCA
CTATCGCTAC ACGCACAAAC AAATCTTGCA GAAACTTACG ACGGTACTAA TATTACCGGC
ATTGAAAAAA TAATTGCTGA AATTGAATTA CAAAAAAATG GAACGAGTGA GCAACAATGG
CGCATTGACG CTCAGCAGCG AATTAATAAA TACCGTAAGT CCCAAATCAC TGTTGAGGTA
AAGGACAAGA ATGGCATTCC TTTACCTAAT GCTAAGGTCG AGTTAAAGCA ACTTAACCAT
AAATTCAACT TCGGTGGAGT AATCTCTACT AAGAAATTTG CGAAACAAGC AGAGGTATTA
CCAAACTTCA TTAATCAAAT TGGCTTCAAC AACGGGCTAA AATACAAACA TAAAGAAAGA
TTAGCGGATA CTGTAGAACC AATAATAGAT TGGGCAAAAC AACACGATAT CAGCGCTCGC
GGTCATGTAC TTGTTTACCC TGGCTGGCAG TTTATGCACA AAGACGCCAA AAAATTAAAG
AACAATCCTG AGCAGTTAAA AAACTTTATA GAAGCTCAAC TATATGACTA TGCAAAGCGT
TGGGATGTTG TCGAATGGGA TGTAATGAAT GAACCGTTAG ACAATCTTGA AATTGCTAAC
CTTTTAGGTC GAGATATTAT GGCTGATTGG TTCAAGCAAG CACAAAAACA CGTTAGAAAT
AAAGATGCTC GTTTATTTAT TAATGAAAAT AGAATTATTT CAGCCCCACC AGCCAATATT
GATCGGATTG TAGAATACAA AAAAATTATT AAAGAAATAA TTGCTGACGG CGGTCCTATT
GAAGCTATTG GTGTACAAGC ACGATTTAGA GTTGACTCCA TTACCCCTGA AATGGTCTAT
CAGCGCCTTG AACAATTTAA TGAGTTCAAC CTCCCTATCG TTGCTACTGA GTTTGAAATA
GTAAATACAC CACGCTACAA CTTCAAGCCA ACACACTTGA GGCGCGCTCA AATGACTGAA
GAGTACATGC AAGTGCTTTT CTCCCACCCT AATGTAGATG GCATCGTTGC ATGGACGGTA
TTAAATAATT TAACAAGTCG CTCTTCAGCT AATGATAAAT CAACTACCAA TGAAAAAGAA
ACCAGAGGAC TATTAAACTG GGATATGAGT TTGCCCCTTA ATGGTAAAAT TTGGCTATAT
CTTATCAATA ACCACTGGCA AACAAATGAA ACTAAACAAA CGAATAGCGC TGGAAAAATT
GATGTCAGTG CTTTCCATGG CAAGTATCAA GTTACTGTAA GCCAAGGTGA CAGTAATATT
GTGCATACGA TTAACATTGA TAAAAATACT AACGAGATAG CCCTTTCCTT TTAA
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| Protein sequence | MNYPLKTLPI IVPAAFWLLS LSLHAQTNLA ETYDGTNITG IEKIIAEIEL QKNGTSEQQW
RIDAQQRINK YRKSQITVEV KDKNGIPLPN AKVELKQLNH KFNFGGVIST KKFAKQAEVL
PNFINQIGFN NGLKYKHKER LADTVEPIID WAKQHDISAR GHVLVYPGWQ FMHKDAKKLK
NNPEQLKNFI EAQLYDYAKR WDVVEWDVMN EPLDNLEIAN LLGRDIMADW FKQAQKHVRN
KDARLFINEN RIISAPPANI DRIVEYKKII KEIIADGGPI EAIGVQARFR VDSITPEMVY
QRLEQFNEFN LPIVATEFEI VNTPRYNFKP THLRRAQMTE EYMQVLFSHP NVDGIVAWTV
LNNLTSRSSA NDKSTTNEKE TRGLLNWDMS LPLNGKIWLY LINNHWQTNE TKQTNSAGKI
DVSAFHGKYQ VTVSQGDSNI VHTINIDKNT NEIALSF
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