Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | CPS_2055 |
Symbol | |
ID | 3520042 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Colwellia psychrerythraea 34H |
Kingdom | Bacteria |
Replicon accession | NC_003910 |
Strand | + |
Start bp | 2134757 |
End bp | 2135665 |
Gene Length | 909 bp |
Protein Length | 302 aa |
Translation table | 11 |
GC content | 35% |
IMG OID | 637284515 |
Product | LysR family transcriptional regulator |
Protein accession | YP_268783 |
Protein GI | 71279583 |
COG category | [K] Transcription |
COG ID | [COG0583] Transcriptional regulator |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 6 |
Plasmid unclonability p-value | 0.505103 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGACTAATT ACACCTTAAA GCAACTCAGG TACTTTGTTG CCGTAGCCGA TTCTGGCAAC GTCACAGAAG CAAGTGAGAA TCTATTTATA TCGCAACCTG CGATATCAAA TGCAATTTCT CAACTTGAAG AAACGTTAAA TACCCAACTT TTAATTAGAC ATCATGCTAA AGGTGTCTCT TTAACGCCTG CAGGTGAAGA GATGGTATCT CATTGTCGTA ACTTGTTATC CCATGCTGAA GAAATTAATG CTCAAATGAC TCAGCATAGT ACCTTAATTT CAGGCACGAT AAATGTTGGC TGCTACGCAA GTTTAGGCCC TATTTATGCC CCTAAGTTAA TTCAAGGATT TACTACACTC TATCCTGATA TTAACTTCAA ATTATTTGAA GGGAATATTG AAGAGATAAA TGAGGCACTT ATTTCGGGTA AAATTGAAAT GGCCTTGATG TATGACTTAA ATAATAATGG TCAAATTGAA TCAACTGAGC TAGCTAAAAT CAGCCCACAT GTCTTGTTAT CAATTAAGCA TCCGTTGGCT AAAAGAAAAA AAATTAATTT AATGACGTTA CAAGATGAAC CTTTGATTTT ATTAGATCTA CCCAATTCAA GTAAATATTT TCAATCATTA TTTGAGCAAT ATGACAAACA TCCTTTTATT AAACATCGCA CTAAGAGTAT AGAAATGCTT CGTAGTCTAG TTGCTAATGG CGAAGGTTAC GCTTTAATGA ACGCAAAAGT AAAATCAACC ACTTGTTTCG ACGGCTCTGA ATTAATTAGT GTTCCATTGG CTGATTATGC CAAGCCCCTT TCGGTAGTTA TCTCTAAAGT TTCAGGGATA AAACTCCCAA AAAGGTGTGA GGCTTTTTTA GAGTTTTGCA TCAAAAATTT TAATGTTGAT AATAACTAA
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Protein sequence | MTNYTLKQLR YFVAVADSGN VTEASENLFI SQPAISNAIS QLEETLNTQL LIRHHAKGVS LTPAGEEMVS HCRNLLSHAE EINAQMTQHS TLISGTINVG CYASLGPIYA PKLIQGFTTL YPDINFKLFE GNIEEINEAL ISGKIEMALM YDLNNNGQIE STELAKISPH VLLSIKHPLA KRKKINLMTL QDEPLILLDL PNSSKYFQSL FEQYDKHPFI KHRTKSIEML RSLVANGEGY ALMNAKVKST TCFDGSELIS VPLADYAKPL SVVISKVSGI KLPKRCEAFL EFCIKNFNVD NN
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