Gene CPS_2018 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCPS_2018 
Symbol 
ID3520040 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameColwellia psychrerythraea 34H 
KingdomBacteria 
Replicon accessionNC_003910 
Strand
Start bp2090942 
End bp2091766 
Gene Length825 bp 
Protein Length274 aa 
Translation table11 
GC content31% 
IMG OID637284480 
Producthypothetical protein 
Protein accessionYP_268748 
Protein GI71279581 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0453022 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACAAGTA ATCATAAATT AAATCAATTT AAATATAAAA GTCATGGCTA TAATATTTAC 
TCATTTAAAG AGAGTGGTTA TAACAGCAAA GCCTTAAATA ATATATTTAA ACTATGTGAA
TCTATGCTTT TTGCTTATTC AAAAGTATTT CTCTTTAGAA TAGATTTCCA TGTAAATGAA
CACTCACCTA ATAATCAGTT AGTTTCTAAC TTCCTGGCTA ACTATATAAA GCATTTAGAA
AAGATATATC AGTGCAAAGC TAGTTATATT TGCGTTAGAG AACAAAACAT ATCTGCAAAA
CAGCATTATC ATTTAGCATT TATCTTAAGT GGTCATAAAG TTTGCTACCC AGATAAAATA
ACTAAAGATT GTGCATCAGC TTGGAAAAGG CATAGTTCAG GTTCAGTACA CTTTCCAAAA
AAGTGTTATT ACATGATTAA ACGTGGTGAT AAAAGAAGCA TTAATCCATG CATATATCGC
CTTAGCTACT TTGTGAAAAA CCATTCTAAA AATCTAAACG GCACGGCTAA AAGCTATTTA
ATGAGTCGTA TTAAAAATGC GAAGCTTTTA CCTGAGTGTG ATTACTTATT TGTAGAACCT
GAGGTTACCT TAAAAAATAA TCAAGATAGA AATAACGGCT TAGTTAATGA GGGGAGCGAA
GTTGATGACA GTTTAACTGC AATACGGCGA GGACAACCAA AAAGTAATAT AGCGCCTGTA
ATCGTATCTG ATGAATTTGT GCAACGTTAT CAAATTAAAG CTTTAGTAAA TGAAATAATA
AATGAAGACT TTGATATAAC CATAATTATA TTCAAACCGC CGTAA
 
Protein sequence
MTSNHKLNQF KYKSHGYNIY SFKESGYNSK ALNNIFKLCE SMLFAYSKVF LFRIDFHVNE 
HSPNNQLVSN FLANYIKHLE KIYQCKASYI CVREQNISAK QHYHLAFILS GHKVCYPDKI
TKDCASAWKR HSSGSVHFPK KCYYMIKRGD KRSINPCIYR LSYFVKNHSK NLNGTAKSYL
MSRIKNAKLL PECDYLFVEP EVTLKNNQDR NNGLVNEGSE VDDSLTAIRR GQPKSNIAPV
IVSDEFVQRY QIKALVNEII NEDFDITIII FKPP