Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | CPS_2018 |
Symbol | |
ID | 3520040 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Colwellia psychrerythraea 34H |
Kingdom | Bacteria |
Replicon accession | NC_003910 |
Strand | + |
Start bp | 2090942 |
End bp | 2091766 |
Gene Length | 825 bp |
Protein Length | 274 aa |
Translation table | 11 |
GC content | 31% |
IMG OID | 637284480 |
Product | hypothetical protein |
Protein accession | YP_268748 |
Protein GI | 71279581 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 3 |
Plasmid unclonability p-value | 0.0453022 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGACAAGTA ATCATAAATT AAATCAATTT AAATATAAAA GTCATGGCTA TAATATTTAC TCATTTAAAG AGAGTGGTTA TAACAGCAAA GCCTTAAATA ATATATTTAA ACTATGTGAA TCTATGCTTT TTGCTTATTC AAAAGTATTT CTCTTTAGAA TAGATTTCCA TGTAAATGAA CACTCACCTA ATAATCAGTT AGTTTCTAAC TTCCTGGCTA ACTATATAAA GCATTTAGAA AAGATATATC AGTGCAAAGC TAGTTATATT TGCGTTAGAG AACAAAACAT ATCTGCAAAA CAGCATTATC ATTTAGCATT TATCTTAAGT GGTCATAAAG TTTGCTACCC AGATAAAATA ACTAAAGATT GTGCATCAGC TTGGAAAAGG CATAGTTCAG GTTCAGTACA CTTTCCAAAA AAGTGTTATT ACATGATTAA ACGTGGTGAT AAAAGAAGCA TTAATCCATG CATATATCGC CTTAGCTACT TTGTGAAAAA CCATTCTAAA AATCTAAACG GCACGGCTAA AAGCTATTTA ATGAGTCGTA TTAAAAATGC GAAGCTTTTA CCTGAGTGTG ATTACTTATT TGTAGAACCT GAGGTTACCT TAAAAAATAA TCAAGATAGA AATAACGGCT TAGTTAATGA GGGGAGCGAA GTTGATGACA GTTTAACTGC AATACGGCGA GGACAACCAA AAAGTAATAT AGCGCCTGTA ATCGTATCTG ATGAATTTGT GCAACGTTAT CAAATTAAAG CTTTAGTAAA TGAAATAATA AATGAAGACT TTGATATAAC CATAATTATA TTCAAACCGC CGTAA
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Protein sequence | MTSNHKLNQF KYKSHGYNIY SFKESGYNSK ALNNIFKLCE SMLFAYSKVF LFRIDFHVNE HSPNNQLVSN FLANYIKHLE KIYQCKASYI CVREQNISAK QHYHLAFILS GHKVCYPDKI TKDCASAWKR HSSGSVHFPK KCYYMIKRGD KRSINPCIYR LSYFVKNHSK NLNGTAKSYL MSRIKNAKLL PECDYLFVEP EVTLKNNQDR NNGLVNEGSE VDDSLTAIRR GQPKSNIAPV IVSDEFVQRY QIKALVNEII NEDFDITIII FKPP
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