| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CPS_1926 |
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| Symbol | |
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| ID | 3520256 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Colwellia psychrerythraea 34H |
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| Kingdom | Bacteria |
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| Replicon accession | NC_003910 |
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| Strand | + |
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| Start bp | 1982226 |
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| End bp | 1984565 |
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| Gene Length | 2340 bp |
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| Protein Length | 779 aa |
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| Translation table | 11 |
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| GC content | 40% |
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| IMG OID | 637284388 |
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| Product | TonB-dependent receptor |
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| Protein accession | YP_268656 |
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| Protein GI | 71279795 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG1629] Outer membrane receptor proteins, mostly Fe transport |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 5 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAAAGCG TCTCAGCCTG TCTAAGCTTT TTTATTATCT TGCCCGTATT AGGACAAGAT
ATAAATGATA TGGAAAAAAT TAATGTTTAT GGTCAAACGC CACTGTCGAG TACTGTCGTC
AGTGATCACA GTGCTTTTGG CAGTGTTCAA ACGATAGATG CGCAAGCGCT TGTTCAATCG
CAAGCTATCT CTTTAGCCGA ACATATGAAG AATCAGCTGA CGAGTTTGCA TATAAATGAC
GTGCAAAATA ATCCATTTCA GCCTGATGTT CAATACAGAG GGTTTACCGC TTCACCGCTA
TTAGGCTTAC CTCAGGGCAT CTCTGTTTAT TTAAATGGCG TACGATTTAA TGAACCCTTT
GGTGATACCG TAAATTGGGA TTTAATACCT CTTGCGGCGC TTGACACTGT TTCTTTATAT
TCTGGTTCAA ACCCTGCTTT TGGCCAAAAC ACCTTAGGCG GTGCGCTCGC GTTACAGACA
AAAAATGGCT TTAGCTATAC ACAAAATGAG CTTGAGGCTC GTTTTGGTAG CTTTGGACAA
CAACAATATA CGGTGCAATC TGGCGGTAAT AAGGGCAATT GGGGTTATTA TTTTGTTGCC
AACAAGTATC AAGAGGATGG TTGGCGAGAT CATTCTGCAA GTGAATTACA ACAGATGCTT
GCAACCCTTA CTTATGCGAG TGAACGTCGT ACCATCGATT TTATTGTTTC TGCCAATAAT
AACGAAATGC TTGGTAATGG CGCAGTGCCA GAAAAACTTG CTGGATTAGC GGGTAGAAGC
GCTATTTATA CCCAGCCAGA TAAAACCGAC ACGAGTTTTC AACAGTTCAT TGTTAAGGCC
GACAATGTTA TTAACGATCA AATGTCATGG CAGGCAAATG TTTATTATCG CCAAAACGAA
ATTAACAGCT TAAATGGTGA TGACAGTGAT TATGAAGAGT GTGAGTCTGG CTCGCTTTAT
AGCTTGTGTG AAGAGGGGGA AGATGACTCT TTAGAGCGAG TTCATTTTGT TGGTTATGAT
GAAGATACTT GGTTAAGCGA ACTAAGTGAT ATTGATGCAG ACGATATAGA TGGTACTTTG
AATACAGGTT TAACGGATAA TGAAAGTTAT GGTGCTGCGC TGCAATGGGT TGGATTAAGT
CATTTTGATG CTTCTGAATC TTTCTACGCT GTTGATAATG AATTTATTTT TGGCTTGGGT
GTAGATCAAG CTCAAATTAG TTTCAACAGC GATACCCAAT TTGGCATACT TAATAATGAA
ACAGTAGATG ATGACCGTTC GGTAACCGGT ATTGGTTTGT ATGATAGTGA ATCACGTGTA
AGTTTAAAGG TGAAAACTCA ACAGCAATAT CTTTACTTTT TAAATGCGAT GACATTCGGG
GGGAATTTTA CCCTTAACCT CGCTGGTCGT TACAATTACG CCGATGTGAG CATGAAGGAT
CAAATTGAGA CTGGCAAAGG CTCACTAAAC GGTGAGCATG TTTTTCATCG TTTTAATCCG
GCAATTTCTG TTAACTATCA GCTTAATCAA GAGTACTCGG TTAAATTAAG TTACAGTGAA
TCTTCACGTA CACCTAGCCC TGCTGAATTG AGTTGTGCGG ATGAAGAAGA CCCGTGTAAA
TTACCCAATG CTTTTGTTGC CGATCCGCCT CTTGAGCAAG TTGTTGCCAA AACAACAGAA
GCGTCTTTAC ATTACGATAA TACCAATTTT TCAGCGCTAG CCACGGTTTT TTCAACCTTG
AGTTATCAAG ATATTATCTT CCAACAGGCG GGTGAAAAGT CTAATGAAGG TTACTTTATC
AACCTTGATA AAACTCAGCG CCAAGGAGTA GAGCTTGCGT TTTCCACCCA AGTTGGCGAT
GTTGATTTTA GTGCTAGTTA TAACTATTTA AAAGCAACGT TTGAATCTCC CTTTGTCTCT
TTTAGTCCTG TTAATCCTTT AGGACCGAAC AGACAAGTTA ATCCAGGTGA TGAAATACCA
GGACAACCTC AAAACCAGTT TAAATTCCAT ATAAATTGGC TGTTCAACGA CCAGATAAAT
GTCGGCACAG AATTTTTATA TGCCTCTTCA TCCTATTATC GAGGTGATGA AGCAAACGAT
AATAAGAAAA TACCGGGTTA TGCAGTAACC AATATTTATC TGAATTATCA AATCAATGAG
CGACTACGTT TATCTGCGAA AGTGGATAAT TTATTTGACC GTCATTTTGA TACGTTTGGA
ACCTATGGCG AAGCCGATGA AGTGCTAGGC GAACTATACC CAGATACGGA ATTTGATGAA
TACTTTGTCG GACCATCAAG ACCACGTGCT ATCAGCGTCA GTATTAACTA TCAGTTCTAA
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| Protein sequence | MKSVSACLSF FIILPVLGQD INDMEKINVY GQTPLSSTVV SDHSAFGSVQ TIDAQALVQS
QAISLAEHMK NQLTSLHIND VQNNPFQPDV QYRGFTASPL LGLPQGISVY LNGVRFNEPF
GDTVNWDLIP LAALDTVSLY SGSNPAFGQN TLGGALALQT KNGFSYTQNE LEARFGSFGQ
QQYTVQSGGN KGNWGYYFVA NKYQEDGWRD HSASELQQML ATLTYASERR TIDFIVSANN
NEMLGNGAVP EKLAGLAGRS AIYTQPDKTD TSFQQFIVKA DNVINDQMSW QANVYYRQNE
INSLNGDDSD YEECESGSLY SLCEEGEDDS LERVHFVGYD EDTWLSELSD IDADDIDGTL
NTGLTDNESY GAALQWVGLS HFDASESFYA VDNEFIFGLG VDQAQISFNS DTQFGILNNE
TVDDDRSVTG IGLYDSESRV SLKVKTQQQY LYFLNAMTFG GNFTLNLAGR YNYADVSMKD
QIETGKGSLN GEHVFHRFNP AISVNYQLNQ EYSVKLSYSE SSRTPSPAEL SCADEEDPCK
LPNAFVADPP LEQVVAKTTE ASLHYDNTNF SALATVFSTL SYQDIIFQQA GEKSNEGYFI
NLDKTQRQGV ELAFSTQVGD VDFSASYNYL KATFESPFVS FSPVNPLGPN RQVNPGDEIP
GQPQNQFKFH INWLFNDQIN VGTEFLYASS SYYRGDEAND NKKIPGYAVT NIYLNYQINE
RLRLSAKVDN LFDRHFDTFG TYGEADEVLG ELYPDTEFDE YFVGPSRPRA ISVSINYQF
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