Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | CPS_1798 |
Symbol | |
ID | 3520574 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Colwellia psychrerythraea 34H |
Kingdom | Bacteria |
Replicon accession | NC_003910 |
Strand | + |
Start bp | 1844352 |
End bp | 1848206 |
Gene Length | 3855 bp |
Protein Length | 1284 aa |
Translation table | 11 |
GC content | 37% |
IMG OID | 637284261 |
Product | ATP-dependent M41 family peptidase |
Protein accession | YP_268529 |
Protein GI | 71280111 |
COG category | [O] Posttranslational modification, protein turnover, chaperones |
COG ID | [COG0465] ATP-dependent Zn proteases |
TIGRFAM ID | [TIGR01241] ATP-dependent metalloprotease FtsH |
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Plasmid Coverage information |
Num covering plasmid clones | 3 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAATCTAA AAAAATTACT TAACACTTTT TTTGAATATC GCGAAGTACA ATGCTCGGAA ATGCTAATGG ATAATTCTAT GTTAGAGCAA TCTGATGTAG TTCTGCCGTT GGTTTTACTT TATATCAAGT TGGCTATCAA AAACACCAAG CTTGAAGGTA AAGTATTGAA ATGTCAGTTA GTTAAGCAAA CAGAATCATT GTGTTATTTG GCCGCAGAAA ATATTGAATT TATCGATGAA TATATTGCGC TAAATATTAT TGAAGAATTG GGAGGTTATA ATGCAATTGA GCAGATTGAA GATAACCGTC CCTGTTTTGT AGAGATAGAG TCTTTAGTAA CAATGTTTCG TAAGTATTTG CAAAATATAC CAGAAAGACA AAGTTTAGAC GATAATGCAG AGTTTTATCA GCATTATTTG CAAGTTTTCA AGCTGGAGTT AGATGAAGAC TTTATTGAAA CACAAATAGA AGTAGCAGAA AGTTATTGGT ATAAGGATAA TCTATCAGTA AATGGCGACA TAGAAGGTGG TGAAGCGCTT AAACGACAAC CGTTTAAGCT GAAAGAGCAG TATGTAAGGC TAAAATCATC TACGCAGAAT TTTTTTGAAG AACTGTCAGT TTTAGCTTGT TCAACCTACC TATCCGTACA TCCATCAGTT GAAGTACAAA ATATTAAGGT AACAGATCTA CCTGAAATTG ACTGTGAACT GGTGCTTTCT GCACTTATTG GTACTCCAAG CTTTTTGGCA GCCTTGGCAA GCCAATTTCA GTGCCAGCCA AGTCAAGTGT TAATGCCTGA CGATGTTTAC CATGCGCGGA AAAATCTAAA ACATAAGGCT GTTACCCGAA GTTTTTCGGT AAACAATGAC ACGACTAAAA ACTGGTATCA AATAACAAAA AGCTTTGCTT CTAAACTTGT ACTCAATGAA AACTTAAAAT CTTGCTGTGA TTTTTCTTTT ATTGATAACG AGTTTAATGA CTCATTATTT ATTGAAGCAT TATTAAAATG TAAACATCAC ATTATTGCGG AACTTGCGGT GTTAAATCAA TGCAGCAATC GTATTAGTAA AGCAATCAAA GTTGAACAAC AACTCAAACT TGACTTAAAC AAACAAGTTA TAGGCCAGCG AGAGGCTATT GAAAGTTTAA CGAAAGGATA CCTCACCTCC AACATTGCTT TAAGTGAAGG ACCAAGGCTG ATATTTACCT TCGCAGGGCC ATCAGGTGTA GGTAAAACCT ATCTCTCTTC TATTTTTTGT GATTTGCTAA ATCAATATGA ACAATCTGGA TATGCTTTTA CTACCTTCAA TATGGAGCAG TATGCAGACA AGCAAGATGG GATGAAATTG TTTGGTAGCG GTTTACAATA CAATGAGGCT AACCTTGGCG TTTTAACAAG TGCCGTAAGA GCACAACCAA GGCAGGTTTT ACTTTTTGAT GAAATAGAAA AAGCCCATTC AAATGTTACT CAATCACTAC TTAGTATTTT GGATAAAGGC ATAGCCCAAG ATCAAACCAG TCAAGAATTT ATCAGCTTTG ACCAGTGTAT TGTTATTTTT ACAACAAACC TCGGTCAGGA AGTACTAGCA AATAATCATC AAAAACATCA ACTGAATATT TTTGATGTAT TACGGCATGC AGAAAATCCG GCAACTAAAA CCAAGCTCTC GGTTGAATTA ATTAATAGGC TAGCTAAAGG CTATTCAGTA GCATTTTCTC CTTTACAGAT TAATCATTTT GTTTATTTAG CAGAAAAAGA ACTCAACAAA ATCAATGACT ACCAAGAGAT GCTTGATTTT AAATGGCCAG AAAACTTTGC CTCATTTTTG TTGCAATCTT TGGCTCCTGA AATAACGGCA AGAAAATTAA CAAGTTGCTT GGCCAAGCTC AAGGCTGACA TTTTAGTTAA AGCAAGTAGC CTAATTACTG AAGATATGTC GCCAATTTCT TGTGCTGTCA GTGTAACTGA AAATATGCCA AATATTGATG TAAAAAAATT AGTGTTATTC GACAATGACA CTAGACTTCA AGCCCAACTA GCACAGTCTG AATTTTCACT CTCAGCTAGC ATTGTTGATA GTTTTGAAGA TATAAGAGCC ATGCTGGAGC AACATCGACC TGATGCCTTT TTAGTTGATA TAGAATCGAT TGCCAATGGT CAATTGTCTT TAAATGAAAT CACAGAGCAC GTTCATTGCA TTAACAGTCG CATACCAATA TTCAGCTACC GCGTGGTAGA TATACAAATA GACAACCTGA AAGAACAAAC ACTAAATCAT AATGTAAGAG AGCATTTTGA ATTGGATTTA GCCACATTTT CTCTGTCGTT TCCAGCCATG CTTAAACGAA TTAACTATTT CCTTACTATG GAAAAAACTC TATTACGTAT GACAACGCGT AATGAGACGC TAGAGTATCA ATGTCGAGTA GAGCACAATA ACAAGGTACT CGATGTTTCA TTTACCAACC TATCTTATCG TCAGGTTATA CAATCCAAAG ACTTGCAAGA AACCAGTTTA TTTAATCATA GCCTGCCTGA TAATTCACTT GATGATGTTA TCGGCTTAGA AAGAGCTAAA CGTCGCCTTA TTGAGGTAGT TAGCTGGTTA AAGGCTCCGG AAAAACTGCT AAATTTTGGT ATAAAAATAC CGACAGGTTT TTTATTTTCT GGCCCTCCCG GAACGGGAAA AACCCTGTTA GCAAAAGCTG TTGCAGGGGA GTGTGAGTTG CCTTTTTTTA GTGTTGCGGC TTCGGAGCTG TCAACGCCTC ATAGCGGCGG TACAACGGAA AACATCAAAC AATTATTTGC CACAGCGCGA AAATATGCAC CCTCAATTAT TTTTATTGAT GAAATAGATG CTATCGCCGC ACAAAGAACC GATAATTCTG ATGGCAGTTC AAGAGACAAA AATCTAACGG TTAATGCGTT ACTTACTGAA ATGGATGGTT TTTCAATCGC TGAAGTTCCT GTATTTGTTA TGGCAGCTAC TAATCATCCG CAGTTGCTTG ATAGCGCTAT TACTCGTCCG GGTCGATTTG ATGAAACAAT TTATTGTGAC TTACCCAATA AAAATGCCCG ACTGATCTTT TTTAAGCGTT TTGCCAGCAA ACATAAACTG AATTGGCAAG AAACAGAGCT ACAACAATTA GTTTCGTCTG CACAAGGCAT GTCATCAGCT GAAATAGATC AAGTGCTGCG TGAGTCGATT TATCAAGCCG TAGGCGAGAA CCAACAATTA ACCACTGAGC ATATTAAACA AACCATGATC CGCATTGTTT ACGGCGCTCC TTCTGACCAT ATTTTCTTAG GGGCAGAAGA AAAACGTCGT ACTGCCTATC ATGAAGCAGC ACATTTATTA GCGTACAAAT TACTCTTTCC TAAGCAGCCG ATAGATTTTA TTACCATCGA ACCAAGAAAC CAGGCGCTAG GTTTTGTTGC CACCCGTGCC TCAGAAGAAT ATGAAAGTTA TTCAAAACGT AGGGTGATGC ATAAACTGCA AGTATTGTTA GCGGGTAGGG TGGCTGAAAA ACTTTGTACA GGAGACTGTG AAGAAGTCAG TACCGGGGCT TCAAACGATA TAGAAAAAGC GACTCAGCTT GCCATGCATG CTATTTATGA AGGGGGCATT GAACCAACCG TTGGGCCAGT TAATATTGCC ATGCTCACTA AGTTTGAAGA AAGTGACTTA TTAGCTAATG CTCAACAGGC CGTTAAACAA TGGCTAGACC AATCTGAGCA GCAGGTAGAG CAATTGCTAA AAGATCATTA TCAACAGCTA ACATTGGTGG CTGAAACCTT ACTTGATAAA GAGTCATTAT TAGGTGAGGA GATTAACCTC ATATTTGATA GATAA
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Protein sequence | MNLKKLLNTF FEYREVQCSE MLMDNSMLEQ SDVVLPLVLL YIKLAIKNTK LEGKVLKCQL VKQTESLCYL AAENIEFIDE YIALNIIEEL GGYNAIEQIE DNRPCFVEIE SLVTMFRKYL QNIPERQSLD DNAEFYQHYL QVFKLELDED FIETQIEVAE SYWYKDNLSV NGDIEGGEAL KRQPFKLKEQ YVRLKSSTQN FFEELSVLAC STYLSVHPSV EVQNIKVTDL PEIDCELVLS ALIGTPSFLA ALASQFQCQP SQVLMPDDVY HARKNLKHKA VTRSFSVNND TTKNWYQITK SFASKLVLNE NLKSCCDFSF IDNEFNDSLF IEALLKCKHH IIAELAVLNQ CSNRISKAIK VEQQLKLDLN KQVIGQREAI ESLTKGYLTS NIALSEGPRL IFTFAGPSGV GKTYLSSIFC DLLNQYEQSG YAFTTFNMEQ YADKQDGMKL FGSGLQYNEA NLGVLTSAVR AQPRQVLLFD EIEKAHSNVT QSLLSILDKG IAQDQTSQEF ISFDQCIVIF TTNLGQEVLA NNHQKHQLNI FDVLRHAENP ATKTKLSVEL INRLAKGYSV AFSPLQINHF VYLAEKELNK INDYQEMLDF KWPENFASFL LQSLAPEITA RKLTSCLAKL KADILVKASS LITEDMSPIS CAVSVTENMP NIDVKKLVLF DNDTRLQAQL AQSEFSLSAS IVDSFEDIRA MLEQHRPDAF LVDIESIANG QLSLNEITEH VHCINSRIPI FSYRVVDIQI DNLKEQTLNH NVREHFELDL ATFSLSFPAM LKRINYFLTM EKTLLRMTTR NETLEYQCRV EHNNKVLDVS FTNLSYRQVI QSKDLQETSL FNHSLPDNSL DDVIGLERAK RRLIEVVSWL KAPEKLLNFG IKIPTGFLFS GPPGTGKTLL AKAVAGECEL PFFSVAASEL STPHSGGTTE NIKQLFATAR KYAPSIIFID EIDAIAAQRT DNSDGSSRDK NLTVNALLTE MDGFSIAEVP VFVMAATNHP QLLDSAITRP GRFDETIYCD LPNKNARLIF FKRFASKHKL NWQETELQQL VSSAQGMSSA EIDQVLRESI YQAVGENQQL TTEHIKQTMI RIVYGAPSDH IFLGAEEKRR TAYHEAAHLL AYKLLFPKQP IDFITIEPRN QALGFVATRA SEEYESYSKR RVMHKLQVLL AGRVAEKLCT GDCEEVSTGA SNDIEKATQL AMHAIYEGGI EPTVGPVNIA MLTKFEESDL LANAQQAVKQ WLDQSEQQVE QLLKDHYQQL TLVAETLLDK ESLLGEEINL IFDR
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