Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | CPS_1730 |
Symbol | |
ID | 3518353 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Colwellia psychrerythraea 34H |
Kingdom | Bacteria |
Replicon accession | NC_003910 |
Strand | + |
Start bp | 1778968 |
End bp | 1779882 |
Gene Length | 915 bp |
Protein Length | 304 aa |
Translation table | 11 |
GC content | 40% |
IMG OID | 637284193 |
Product | putative tolA protein |
Protein accession | YP_268468 |
Protein GI | 71278760 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG3064] Membrane protein involved in colicin uptake |
TIGRFAM ID | [TIGR02794] TolA protein |
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Plasmid Coverage information |
Num covering plasmid clones | 9 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAGTCAC CTTATTTTAA AGCTGTGTGG CTAAGTATCG CATTGCATGT TGTTTTACTC GTTGGTTTAT TGTCAGGAGA CTTTTCTTCA GAGCCTAAAC CGTTACCTAC GCCAACAAGC CAATCAGCTG AGCCAATTAA GGCAGTAGTT ATTGATAAGG CAAAGTTTGA GCAAGCAGTA AACAAAATTA AGAGACAGAA AATTAATGAG CGTGATGCTG AGAAAAAGCG ACTGAAAGCC GTTGAAAAAC GTGCGTCAGA TGCTAAAAAG CGTCGTGTAC AAGAACAAGC ACGCATTAAA AAATTAGAGA AACAACGTAA GCAAAAAGAA CAAGAAAAGA TTAAGGCAGA TAAAGCGGCT AAATCATCAA AAGCTAAAGC AGCTAAAGCT GAAAAAGTAC GTAAACAAAA AGAGCAGGAG AAACAAGTTG CTGAAAAGGC CGCTGCTGCT GCCAGAAGTA AACGTATAAA AGAAGAAGCG GATGCCAAAA AAGCAGAGGA TTTACGCCTT AAAAAAATTG CAGATCGAAA ACGTCAAGAA ATAGCAGCAA AAGAACAAGC TATTCAAGAT GCTATGTTAG CAGAGCAAAT GGCTGATGAA ATGGCGACCC GTAATAAAGC AAGACACCAA CAAGTGATGA CGGAAGTACA ACGTTATTCA GCGTTGATTC AACAAAGTAT TAATCAACGT ATGATTACAG ATCGCAGCAC TATGGCAGAT AAATCTTGTC GATTAACGCT CACGCTGGCA CCTTCTGGCT TCGTTATTGA TGTAAAAGTA GGGCAAGGCG ATAAAGTGGT GTGTGATGCC GCCAATATAG CCATTGGTAA AGCAGGTACG TTACCAGTTT CTAAAGATCC TGAAGTATTT AAAGAAATGC GAGAAATTGC GGTTACGGTA GAACCCAAAT TTTAA
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Protein sequence | MKSPYFKAVW LSIALHVVLL VGLLSGDFSS EPKPLPTPTS QSAEPIKAVV IDKAKFEQAV NKIKRQKINE RDAEKKRLKA VEKRASDAKK RRVQEQARIK KLEKQRKQKE QEKIKADKAA KSSKAKAAKA EKVRKQKEQE KQVAEKAAAA ARSKRIKEEA DAKKAEDLRL KKIADRKRQE IAAKEQAIQD AMLAEQMADE MATRNKARHQ QVMTEVQRYS ALIQQSINQR MITDRSTMAD KSCRLTLTLA PSGFVIDVKV GQGDKVVCDA ANIAIGKAGT LPVSKDPEVF KEMREIAVTV EPKF
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