Gene CPS_1690 details

Gene Information

• Locus tag: CPS_1690
• ID: 3522180
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Colwellia psychrerythraea 34H
• Kingdom: Bacteria
• Replicon accession: NC_003910
• Strand: +
• Start bp: 1730753
• End bp: 1731355
• Gene Length: 603 bp
• Protein Length: 200 aa
• Translation table: 11
• GC content: 43%
• IMG OID: 637284153
• Product: SCP-like extracellular protein
• Protein accession: YP_268428
• Protein GI: 71281708
• COG category: [S] Function unknown
• COG ID: [COG2340] Uncharacterized protein with SCP/PR1 domains

Plasmid Coverage information

• Num covering plasmid clones: 10
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGCGTTATT GGTTAGTGGG ATTTTTTTGT GTGGGCCTGA TCTCTGGCTG TGGTGGTGAT 
GATGGATCAT CTAGTGACAA CCAGGGATCT GATGAAACTG TCTCTAATGA TGAAAGCCCT 
GATGAGAGTA CCGACTCGAG CAGTGACACA GAAAGTGATA CCAATTATAG CAAAATCAGC 
TGTAACGATG ACTTGATTGC CGTTTTGACT TTGATTAATG AAAAGCGTGC ACAGGAACAA 
ACTTGTGGCA GTGAAAGTTA TGGCCCTGTA GCTGAACTAA ACTGGAATGC TGTATTAACT 
TTGGCTGCAC AAGAGCACTC GGATAATATG GCTAACTATG ATTTTTTCAG CCATACAGGC 
CTTGACGGAA GTACAGTCTC GACCCGGGTT ACAGCTCAAG GTTACACGTG GTCTTATGTG 
GCAGAAAATA TTGCTGGGGG TCAACCTAAT GCGCAGTCTG TAGTTGATGC GTGGATGGGT 
AGTGTCGGAC ATTGTAAGAA TATTATGAGC GAAAACCCAA CGGAAATGGG CTTAGCGTGT 
AGTGAAAACA GCAATGTAAC TTATACCTAT TACTGGACAC AAGTATTTGC TAAACCTCGT 
TAA 

 

Protein sequence

MRYWLVGFFC VGLISGCGGD DGSSSDNQGS DETVSNDESP DESTDSSSDT ESDTNYSKIS 
CNDDLIAVLT LINEKRAQEQ TCGSESYGPV AELNWNAVLT LAAQEHSDNM ANYDFFSHTG 
LDGSTVSTRV TAQGYTWSYV AENIAGGQPN AQSVVDAWMG SVGHCKNIMS ENPTEMGLAC 
SENSNVTYTY YWTQVFAKPR