Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | CPS_1617 |
Symbol | |
ID | 3521521 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Colwellia psychrerythraea 34H |
Kingdom | Bacteria |
Replicon accession | NC_003910 |
Strand | + |
Start bp | 1664999 |
End bp | 1665913 |
Gene Length | 915 bp |
Protein Length | 304 aa |
Translation table | 11 |
GC content | 37% |
IMG OID | 637284080 |
Product | AraC family transcriptional regulator |
Protein accession | YP_268355 |
Protein GI | 71281052 |
COG category | [K] Transcription |
COG ID | [COG4977] Transcriptional regulator containing an amidase domain and an AraC-type DNA-binding HTH domain |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 6 |
Plasmid unclonability p-value | 0.583151 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GTGGATTCCC TTAGCTCCAT TCTTAAAAGT GTTCGATTAC AAGGCAGTGT ATACTTTAAT GCCTGCTTTG CTTCCCCATG GGGACTGGAT TTAGACCAGA ACCAACGAGC CTATTTCCAC CTAATTATCC GTGGAGCATG TTATTTGCAG CTAGGTGATA AAAAAGAGCA GCTACAAGGG GGAGATATTA TTATTCTGCC TCATGGAACA GCTCACCAAC TTTTTGATGA CCCATCTTCA GTGCGCGTTA ATGCTACAGG GGTAGTTCCT GGTTTGATTG ATGGCATTAA CCCTTTTGAG GGAGTCGGGC ATAGTCAAGA TATTGATATC CTGTGTGGTT ATTTTAATTT TAATAACTCG ACACCTAGTT ATTTTTTAAA TGCATTACCT GATGTAATAC ATCTAACACA AGAACATAGA ACCCATTTTT CGTTTTTAGA TAATGCACTT TCTTTCATTA CGCAAGAAAC AAAAATGAAA AATCTCGGCA GAGAAATTTT GATTGATAGA GTTACCGAGT TATTGTTCGT GCAAATAATG CGTGTTTATA TAAATATTAA TGGAAATGAA GAGAATATTT TCTCAGCGTT AAGTGACAGA ACTCTTTCGG AAGCATTACA ACTTATGCAT ACAGAGTCGG ACAAAAACTG GACGGTTGAA AGCTTGGCTA AAGCAATCGG TATGTCTCGG TCTCGCTTCT CCGAGCATTT CCATAATTAT ATTGGCGAAA CTCCCATGCG TTATTTGCAT ACTTGTCGAA TGGAAGTGGC AAAACAAAAA ATTGAAGAAA CAGAATCAAC GTTAAACATA ATATCTGAAG AAGTTGGCTA TGCTTCTGAC AGTGCTTTTA AGAAAGCCTT TAAAAAGTTT TTCGGTAATA CGCCAAGTAC TTTTCGACAA AAAAATGATA AATAA
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Protein sequence | MDSLSSILKS VRLQGSVYFN ACFASPWGLD LDQNQRAYFH LIIRGACYLQ LGDKKEQLQG GDIIILPHGT AHQLFDDPSS VRVNATGVVP GLIDGINPFE GVGHSQDIDI LCGYFNFNNS TPSYFLNALP DVIHLTQEHR THFSFLDNAL SFITQETKMK NLGREILIDR VTELLFVQIM RVYININGNE ENIFSALSDR TLSEALQLMH TESDKNWTVE SLAKAIGMSR SRFSEHFHNY IGETPMRYLH TCRMEVAKQK IEETESTLNI ISEEVGYASD SAFKKAFKKF FGNTPSTFRQ KNDK
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