| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CPS_1568 |
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| Symbol | lpxB |
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| ID | 3523039 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Colwellia psychrerythraea 34H |
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| Kingdom | Bacteria |
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| Replicon accession | NC_003910 |
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| Strand | + |
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| Start bp | 1611372 |
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| End bp | 1612553 |
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| Gene Length | 1182 bp |
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| Protein Length | 393 aa |
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| Translation table | 11 |
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| GC content | 38% |
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| IMG OID | 637284031 |
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| Product | lipid-A-disaccharide synthase |
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| Protein accession | YP_268310 |
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| Protein GI | 71282564 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0763] Lipid A disaccharide synthetase |
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| TIGRFAM ID | [TIGR00215] lipid-A-disaccharide synthase |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACTACTC AAAATCAAAA CACTCACCAA CAAACTGTTT TTGCAATGGT TGTTGGTGAA
CATTCAGGCG ATACGCTCGG CGCAGGCCTG ATCACTTCCT TACGACAGAC TCATCCGCAT
GCTAAATTTA TCGGTATTGG CGGACCCAAA ATGCTAGCCT TAGGTTTTGA AAGCCTATTC
GCTATGGACG AGTTATCGGT CATGGGGTTA GTCGAAGTAC TTGGCCGAAT CAGACGTTTA
TTACATGTCC GTAAAACCTT AACCGATTTT TTTATTACCA ATAAACCCGA TGTGTTTATT
GGTATTGATG CGCCTGACTT TAATATCGGT CTAGAATTAA AACTTAAAGT AAAAGGTATT
AAAACGGTTC ATTATGTTAG TCCGTCAGTC TGGGCTTGGC GTGAAAAACG TATTTTTAAA
ATCGCCAAAG CTACTGATAT GGTCTTAGCC TTGTTGCCTT TCGAAAAAGC TTTTTATGAT
AAGCACAATG TTCCTTGTAC TTTTGTTGGT CATCCACTTG CGGATGATAT TCCGATGCAA
AGTGATAAAG TTTTAGCCAG AGACAAGCTT GGTTTAGCAC AAGATAAAAA AATCTTGGCA
TTGATGCCAG GTAGTCGTGG TGGTGAGTTA TCACGTTTAC TTGAAGATTT TTTTGAAAGT
GCTAAACAAT TACAAGCTCA AGATAGTGAA CTACTCTTTG TCGCGCCCAT GATCAGTGAG
CAGCGGGCCA ATCAATTTAA TGCCCTTAAA GCTGAACTTG CTCCAGATTT AGATATAGAG
ATTGTGCTTA ATCAAACGCA ACAGGTAATG GCTGCCAGTG ATTGTTTATT AACCGCTTCG
GGTACAGTAA CCTTAGAAGC TGCTTTAATT AAACGACCCA TGGTTATTTG TTATAAATTT
AGCCCAATAA CCTTTTTCTT AGGCCGTAGG TTTGTTAAGT TGAAATGGTT CTCTTTACCA
AACTTATTAA CAAATAAATC TTTAGTCCCT GAATTATTGC AAAAGGATGT TTGCCCTGAA
AATATTGTGC CTTTGGTTAA AGAGCGTCTA TATCAGGATC AAAGCCAATT GAATGATAGT
TTTACTGCAA TACATCAACA ACTAAAATGT GATGCGAGTA AACAAGCAGC TAAGGCTGTA
CTTGATGTTT TATCTTCGAA ACTTTTAAGC AATAACAAAT AA
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| Protein sequence | MTTQNQNTHQ QTVFAMVVGE HSGDTLGAGL ITSLRQTHPH AKFIGIGGPK MLALGFESLF
AMDELSVMGL VEVLGRIRRL LHVRKTLTDF FITNKPDVFI GIDAPDFNIG LELKLKVKGI
KTVHYVSPSV WAWREKRIFK IAKATDMVLA LLPFEKAFYD KHNVPCTFVG HPLADDIPMQ
SDKVLARDKL GLAQDKKILA LMPGSRGGEL SRLLEDFFES AKQLQAQDSE LLFVAPMISE
QRANQFNALK AELAPDLDIE IVLNQTQQVM AASDCLLTAS GTVTLEAALI KRPMVICYKF
SPITFFLGRR FVKLKWFSLP NLLTNKSLVP ELLQKDVCPE NIVPLVKERL YQDQSQLNDS
FTAIHQQLKC DASKQAAKAV LDVLSSKLLS NNK
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