Gene CPS_1506 details

Gene Information

• Locus tag: CPS_1506
• ID: 3523012
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Colwellia psychrerythraea 34H
• Kingdom: Bacteria
• Replicon accession: NC_003910
• Strand: +
• Start bp: 1548916
• End bp: 1549359
• Gene Length: 444 bp
• Protein Length: 147 aa
• Translation table: 11
• GC content: 39%
• IMG OID: 637283969
• Product: flagellar protein FliJ
• Protein accession: YP_268248
• Protein GI: 71282537
• COG category: [N] Cell motility; [O] Posttranslational modification, protein turnover, chaperones; [U] Intracellular trafficking, secretion, and vesicular transport
• COG ID: [COG2882] Flagellar biosynthesis chaperone
• TIGRFAM ID: [TIGR02473] flagellar export protein FliJ

Plasmid Coverage information

• Num covering plasmid clones: 11
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGGCAATGA AGCAACTTGA TACTATTTTA AAGTATGAAC AGGACAACGA GCAACGTTGC 
GCCGATCAGT TAAAGATTGC TGAGAATGAA TATCAACAAA ACCTCAGTCG TTTACAAGGC 
GTTGCGGACT ATCGTTTAGA ATATATGAAG CGTTTAAGTG AAAGAGCAAC AAATGGTCTA 
GATAGCGCTA CATACAGTCA TTACCATGCT TTTATTGCTA AGCTTGATAC TGCTTCTAAA 
CAAGTTGAGA TAGCAACGCG ACAAGCAAAA GCACTGGTAG ATCAAAGCAA GAGTCTCTGG 
TTGAAGCAAA GACAAAAAGT AAAAGCGGTT GAGTTATTGC GTGATAAGCG TTTGAAAAAA 
ATTGCAGTAG CAGCAGACAG AGCTGAGCAA AAAATGTTTG ATGAAATAGC TACACAACAA 
TATATTCGCC GCCCTCTGCG TTAA 

 

Protein sequence

MAMKQLDTIL KYEQDNEQRC ADQLKIAENE YQQNLSRLQG VADYRLEYMK RLSERATNGL 
DSATYSHYHA FIAKLDTASK QVEIATRQAK ALVDQSKSLW LKQRQKVKAV ELLRDKRLKK 
IAVAADRAEQ KMFDEIATQQ YIRRPLR