| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CPS_1275 |
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| Symbol | gcvH1 |
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| ID | 3521205 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Colwellia psychrerythraea 34H |
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| Kingdom | Bacteria |
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| Replicon accession | NC_003910 |
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| Strand | + |
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| Start bp | 1310018 |
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| End bp | 1310407 |
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| Gene Length | 390 bp |
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| Protein Length | 129 aa |
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| Translation table | 11 |
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| GC content | 41% |
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| IMG OID | 637283739 |
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| Product | glycine cleavage system H protein |
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| Protein accession | YP_268018 |
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| Protein GI | 71280736 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0509] Glycine cleavage system H protein (lipoate-binding) |
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| TIGRFAM ID | [TIGR00527] glycine cleavage system H protein |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.421201 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGAGCAACA TTCCTTCAGA ATTAAAATAT GCAACTTCAC ACGAATGGGT TCGCGTTGAC
AGCGACGGTA TCGCTACAGT TGGTATCAGT GAACATGCCC AAGGCCTTTT AGGTGATATG
GTATTTGTTG AATTACCTGA CGTTGATGAT TCAATCAGCG CTGGTGATGA TGTTGCTGTT
GCAGAATCAG TAAAAGCAGC TTCAGACATT TACGCACCAG TTTCAGGTAC TGTTGTTGCA
ATCAACGAAG CACTTGAAGA CGCTCCTGAG TTACTTAACT CTGACGCTTT TGGTGAAGGT
TGGTTATTTC AAGTTAAACT TGACGATGTA AGTGAGTTAG AAAACTTACT TGATGCAGAA
GGTTATAAGA ACTCTATCGA CGAAGATTAA
|
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| Protein sequence | MSNIPSELKY ATSHEWVRVD SDGIATVGIS EHAQGLLGDM VFVELPDVDD SISAGDDVAV
AESVKAASDI YAPVSGTVVA INEALEDAPE LLNSDAFGEG WLFQVKLDDV SELENLLDAE
GYKNSIDED
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